Job Description Q47146 Confidence 100.00% Date Thu Jan 5 12:36:21 GMT 2012 Rank 38 Aligned Residues 344 % Identity 17% Template c3mxlB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nitrososynthase; PDBTitle: crystal structure of nitrososynthase from micromonospora carbonacea2 var. africana Resolution 3.15 Å

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		120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure												.	.	.																																																			.
Query SS confidence												.	.	.																																																			.
Query Sequence		L	T	A	E	E	Q	A	F	L	D	.	.	.	G	P	V	E	E	A	C	R	M	A	N	D	F	Q	I	T	H	E	L	A	D	L	P	P	E	L	W	A	Y	L	K	E	H	R	F	F	A	M	I	I	K	K	E	Y	G	G	L	E	F	S	.	A	Y	A	Q	S	R	V	L	Q	K	L	S	G	V	S	G
Query Conservation												.	.	.																																																			.
Alig confidence												.	.	.														.	.	.																																			.
Template Conservation																												.	.	.
Template Sequence		L	T	P	A	G	R	T	V	V	D	L	L	A	G	V	I	P	R	I	S	A	E	A	A	D	R	.	.	.	D	R	T	G	T	F	P	V	E	A	F	E	Q	F	A	K	L	G	L	M	G	A	T	V	P	A	E	L	G	G	L	G	L	T	R	L	Y	D	V	A	T	A	L	M	R	L	A	E	A	D	A
Template Known Secondary structure			S											T	T	T												.	.	.				T														T	G	G	G		S	S		T	T	T	T	S																		T	T
Template Predicted Secondary structure																												.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure															.													.	.	.
Query SS confidence															.													.	.	.
Query Sequence		I	L	A	I	T	V	G	V	P	N	S	L	G	.	P	G	E	L	L	Q	H	Y	G	T	D	E	.	.	.	Q	K	D	H	Y	L	P	R	L	A	R	G	Q	E	I	P	C	F	A	L	T	S	P	E	A	G	S	D	A	G	A	I	P	D	T	G	I	V	C	M	G	E	W	Q	G	Q	Q	V	L	G	M
Query Conservation															.													.	.	.
Alig confidence															.													.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	T	A	L	A	W	H	V	Q	L	S	R	G	L	T	L	T	Y	E	W	Q	H	G	T	P	P	V	R	A	M	A	E	R	L	L	R	A	M	A	E	G	E	A	A	V	C	G	A	L	K	D	A	P	G	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	W
Template Known Secondary structure																							S	S																		T	S								S	B		T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.																							.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		R	L	T	W	N	K	R	Y	I	T	L	A	P	I	A	T	V	L	G	L	A	F	K	L	S	D	P	E	K	L	L	G	G	A	E	D	L	G	I	T	C	A	L	I	P	T	T	T	P	G	V	E	I	G	R	R	H	F	P	L	N	V	P	F	Q	.	N	G	P	T	R	G	K	D	V	F	V	P	I	D
Query Conservation																																																																			.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	S	G	R	K	V	L	V	S	M	A	P	I	A	T	H	F	F	V	H	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	A	V	P	V	V	H	R	D	A	P	G	L	T	V	L	D	N	W	D	G	L	G	M	R	A	S	G	T	L	E	V	V	F	D	R	C	P	V	R	A	D
Template Known Secondary structure											T	T		T	T								B		.	.	.	.	.	.	.	.	.	.	.	.	.	.			B						T	T		T	T										S	S		T	T	S														T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.															.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	I	G	G	P	K	M	A	G	Q	G	W	R	M	L	V	E	C	L	S	V	G	R	G	I	T	L	P	S	N	S	T	G	G	V	K	S	V	A	L	A	T	G	A	Y	A	H	I	R	R	Q	F	K	I	S	I	G	K	M	E	G	I	E	E	P	L	A	R	I	A	G	N	A	Y	V	M	D	A	A
Query Conservation
Alig confidence								.	.	.				.	.	.	.	.								.
Template Conservation								.	.	.				.	.	.	.	.								.
Template Sequence		E	L	A	R	R	D	.	.	.	A	V	L	.	.	.	.	.	A	G	Q	T	V	S	S	.	I	T	M	L	G	I	Y	A	G	I	A	Q	A	A	R	D	I	A	V	G	F	C	A	G	R	G	G	E	P	R	A	G	A	R	A	L	V	A	G	L	D	T	R	L	Y	A	L	R	T	T	V	G	A	A	L
Template Known Secondary structure							T	.	.	.	T			.	.	.	.	.								.	G	G	G																					T	T		S
Template Predicted Secondary structure								.	.	.				.	.	.	.	.								.
Template SS confidence
		227	.	.	230	.	.				.	.	.						.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		431	.	.	.	.	.	.	.	.	440	.	.	.	.								.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.
Query Sequence		A	S	L	I	T	Y	G	I	M	L	G	E	K	P	.	.	.	.	.	.	.	A	V	L	S	A	I	V	K	Y	H	C	T	H	R	G	Q	Q	S	I	I	D	A	M	D	I	T	G	G	K	G	I	M	L	G	Q	S	N	F	L	A	R	A	Y	Q	G	A	P	I	A	I	T	V	E	G	A	N	I	L	T
Query Conservation																.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.																																		.	.
Template Conservation																																																								.	.
Template Sequence		T	N	A	D	A	A	S	V	D	L	S	G	D	P	D	E	R	G	R	R	M	M	T	P	F	Q	Y	A	K	M	T	V	N	E	L	A	P	A	V	V	D	D	C	L	S	L	V	G	G	L	A	Y	T	A	.	.	G	H	P	L	S	R	L	Y	R	D	V	R	A	G	G	F	M	Q	P	Y	S	Y	V	D
Template Known Secondary structure										S			S		T	T																																		G	G	G	G	S	T	.	.	T	S									G	G	G	G	G	G		S	S
Template Predicted Secondary structure																																																								.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.			.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		504	.	.	.	.	.	510	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	M	M	I	F	G	Q	G	A	I
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		A	.	V	D	Y	L	S	G	Q	A	L
Template Known Secondary structure			.									S
Template Predicted Secondary structure			.
Template SS confidence
		383		.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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