Job Description Q47146 Confidence 100.00% Date Thu Jan 5 12:36:21 GMT 2012 Rank 30 Aligned Residues 375 % Identity 24% Template c3mpjG_ PDB info PDB header:oxidoreductase Chain: G: PDB Molecule:glutaryl-coa dehydrogenase; PDBTitle: structure of the glutaryl-coenzyme a dehydrogenase Resolution 2.10 Å

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		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																									.												.																													.	.
Query SS confidence																									.												.																													.	.
Query Sequence		R	L	T	A	E	E	Q	A	F	L	D	G	P	V	E	E	A	C	R	M	A	N	D	.	F	Q	I	T	H	E	L	A	D	L	P	.	P	E	L	W	A	Y	L	K	E	H	R	F	F	A	M	I	I	K	K	E	Y	G	G	L	E	F	S	A	.	.	Y	A	Q	S	R	V	L	Q	K	L	S	G	V	S
Query Conservation																									.												.																													.	.
Alig confidence																									.												.																													.	.
Template Conservation
Template Sequence		N	L	S	K	E	L	Q	M	L	Q	K	E	V	R	N	F	V	N	K	K	I	V	P	F	A	D	Q	W	D	N	E	N	H	F	P	Y	E	E	A	V	R	P	M	G	E	L	G	F	F	G	T	V	I	P	E	E	Y	G	G	E	G	M	D	Q	G	W	L	A	A	M	I	V	T	E	E	I	A	R	G	S
Template Known Secondary structure																						T	T	T	T								T				T	T	T	T							T	T	T	T		T	T	S		G	G	G	T	S				T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	L	A	I	T	V	G	V	P	N	S	L	G	P	G	E	L	L	Q	H	Y	G	T	D	E	Q	K	D	H	Y	L	P	R	L	A	R	G	Q	E	I	P	C	F	A	L	T	S	P	E	A	G	S	D	A	G	A	I	P	D	T	G	I	V	C	M	G	E	W	Q	G	Q	Q	V	L	G	M	R	L	T
Query Conservation
Alig confidence																.																																																					.	.	.	.	.	.	.	.
Template Conservation																.																																																					.	.	.	.	.	.	.	.
Template Sequence		S	A	L	R	V	Q	L	N	M	E	V	L	G	C	.	A	Y	T	I	L	T	Y	G	S	E	A	L	K	K	K	Y	V	P	K	L	S	S	A	E	F	L	G	G	F	G	I	T	E	P	D	A	G	S	D	V	M	A	M	S	S	T	A	E	D	K	G	D	.	.	.	.	.	.	.	.	H	W	L	L	N
Template Known Secondary structure												T	T	T	T	.								S														T	T	S	S								B	T	T	B	S	S		G	G	G									S	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.																																																					.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.									150	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																																											.																					.
Query SS confidence																																											.																					.
Query Sequence		W	N	K	R	Y	I	T	L	A	P	I	A	T	V	L	G	L	A	F	K	L	S	D	P	E	K	L	L	G	G	A	E	D	L	G	I	T	C	A	L	I	.	P	T	T	T	P	G	V	E	I	G	R	R	H	F	P	L	N	V	P	F	.	Q	N	G	P	T	R	G	K	D	V	F	V	P	I	D	Y	I
Query Conservation																																											.																					.
Alig confidence																									.	.	.	.	.	.													.												.									.
Template Conservation																									.	.	.	.	.	.																									.
Template Sequence		G	S	K	T	W	I	S	N	A	A	Q	A	D	V	L	I	Y	Y	A	Y	T	D	K	.	.	.	.	.	.	A	A	G	S	R	G	L	S	A	F	V	I	E	P	R	N	F	P	G	I	K	T	S	N	.	L	E	K	L	G	S	H	A	S	P	T	G	E	L	F	L	D	N	V	K	V	P	K	E	N	I
Template Known Secondary structure									T	T	T	T		S	S							S		S	.	.	.	.	.	.	T	T	G	G	G	S								T	T	T	S	T	T						.				S	S		T	T	S														G	G	G
Template Predicted Secondary structure																									.	.	.	.	.	.																									.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.							.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	G	P	K	M	A	G	Q	G	W	R	M	L	V	E	C	L	S	V	G	R	G	I	T	L	P	S	N	S	T	G	G	V	K	S	V	A	L	A	T	G	A	Y	A	H	I	R	R	Q	F	K	I	S	I	G	K	M	E	G	I	E	E	P	L	A	R	I	A	G	N	A	Y	V	M	D	A	A	A	S
Query Conservation
Alig confidence						.	.	.																.
Template Conservation						.	.	.																.
Template Sequence		L	G	K	P	.	.	.	G	D	G	A	R	I	V	F	G	S	L	N	H	T	R	.	L	S	A	A	A	G	G	V	G	L	A	Q	A	C	L	D	A	A	I	K	Y	C	N	E	R	R	Q	F	G	K	P	I	G	D	F	Q	M	N	Q	D	M	I	A	Q	M	A	V	E	V	E	A	A	R	L	L	A	Y
Template Known Secondary structure			S	S	T	.	.	.	T															.																												T	T			G	G	G	S
Template Predicted Secondary structure						.	.	.																.
Template SS confidence
		228	.	230	.				.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		433	.	.	.	.	.	.	440	.		.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		L	I	T	Y	G	I	M	L	G	.	E	K	P	A	V	L	S	A	I	V	K	Y	H	C	T	H	R	G	Q	Q	S	I	I	D	A	M	D	I	T	G	G	K	G	I	M	L	G	Q	S	N	F	L	A	R	A	Y	Q	G	A	P	I	A	I	T	V	E	G	A	N	I	L	T	R	S	M	M	I	F	G	Q
Query Conservation											.
Alig confidence											.																																					.	.
Template Conservation																																																.	.
Template Sequence		K	A	A	A	A	K	D	E	G	R	L	N	N	G	L	D	V	A	M	A	K	Y	A	A	G	E	A	V	S	K	C	A	N	Y	A	M	R	I	L	G	A	Y	G	Y	S	T	.	.	E	Y	P	V	A	R	F	Y	R	D	A	P	T	Y	Y	M	V	E	G	S	A	N	I	C	K	M	I	I	A	L	D	Q
Template Known Secondary structure									T	T		T	T	B																											G	G	G	T	S		T	.	.	T	S	S								G	G	G	G	G	T	S	S	S
Template Predicted Secondary structure																																																.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.			350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		512	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	V	R
Template Known Secondary structure		T	T	S
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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