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Job DescriptionQ47146
Confidence100.00%DateThu Jan 5 12:36:21 GMT 2012
Rank26Aligned Residues377
% Identity14%Templatec3mkhC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:nitroalkane oxidase; PDBTitle: podospora anserina nitroalkane oxidase
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   119120.........130........ .140.........150.........160.........170.........180.........
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Query Sequence  RLTAEEQAFLDGPVEEACRM. . . . . . . . . ANDFQITHELADLPPELWAYLKEHRFFAMIIKKEYGGLEFSAYAQSRVLQK
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Template Sequence  HLSASQKGTYQA. ARSLARNLLMPARQTYLQHPPNSPLRFQSTQPTYAAAVSAGILKGQISPAHGGTGGTLIESAILVEE
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.TTTS
TT
TTTTTTTGGGS
GGGT




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   6...10....... ..20.........30.........40.........50.........60.........70.........80....
 
   190.........200.........210.........220.........230.. .......240........ .250.........260..
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Query Sequence  LSGVSGILAITVGVPNSLGPGELLQHYGTDEQKDHYLPRLARG. . QEIPCFALTSPEAGSD. . . . . AGAIPDTGIVCMGE
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Template Sequence  CYSVEPSAALTIFATGL. . . GLTPINLAAGPQHAEFLAPFLSGEGSPLASLVFSEPGGVANALEKGAPGFQTTARLEGD.
Template Known Secondary structure  TT
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GGGSS
S





TT
STTTT
TTS


S
TT.
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   85....90.........100. ........110.........120.........130.........140.........150.........160
 
   263......270.........280....... ..290.........300.........310....... ..320.........330.
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Query Sequence  WQGQQVLGMRLTWNKRYITLAPIAT. . . . . VLGLAFKLSDPEKLLGGAEDLGITCALIPT. . . . . . TTPGVEIGRRHFPL
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Template Sequence  . . . . . . . EWVINGEKMWATNCAGWDFKGCDLACVVCRDATTPLEEGQDPENKVMIILVTRADLDRNGEGSFEVLRHVATP
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S
TTTT
TTSS

S
SS


TT

GGGG
TTS



S
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   161........170.........180.........190.........200.........210.........220.........230...
 
   332.... ...340.........350.........360.........370.........380.........390.........400..... ....
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Query Sequence  NVPFQ. NGPTRGKDVFVPIDYIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGVKSVALATGAYAHIRRQFKI. SIGK
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Template Sequence  GHTSVSGPHVRYTNVRVPTKNVLCPA. . . GQGAKVAFGAFDGSA. VLVGAMGVGLMRAAFDAALKFAKEDNRGGAVPLLE
Template Known Secondary structure  S
TT



GGG
T...TS.

SS
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GGG
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   234.....240.........250......... 260.........270.... .....280.........290.........300.........
 
   410.........420.........430.........440.... .....450.........460.........470.........480.....
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Query Sequence  MEGIEEPLARIAGNAYVMDAAASLITYGIMLGEKP. . . . AVLSAIVKYHCTHRGQQSIIDAMDITGGKGIMLGQSNFLAR
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Template Sequence  RQAFADLLSGVKIQTEAARALTWKAAHAMENGPGDYDARRELALAAKVFCSEAAVKACTDVINAVGISAYDL. . QRPFSD
Template Known Secondary structure  S
SS
GGGGGST..TST
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   310.........320.........330.........340.........350.........360.........370.........380. ......
 
   486...490.........500. ........510.....
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Query Sequence  AYQGAPIAITVEGANI. LTRSMMIFGQGAIR
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Template Sequence  LLNTAVVLPIFDGGNVGIRRRHL. . QQLMLK
Template Known Secondary structure  TSSS
TTTT..S
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   388.390.........400.........410 ......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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