Job Description Q47146 Confidence 100.00% Date Thu Jan 5 12:36:21 GMT 2012 Rank 11 Aligned Residues 368 % Identity 23% Template c2pg0B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl-coa dehydrogenase from geobacillus2 kaustophilus Resolution 1.80 Å

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		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		L	T	A	E	E	Q	A	F	L	D	G	P	V	E	E	A	C	R	M	A	N	D	.	F	Q	I	T	H	E	L	A	D	L	P	P	E	L	W	A	Y	L	K	E	H	R	F	F	A	M	I	I	K	K	E	Y	G	G	L	E	F	S	A	Y	A	Q	S	R	V	L	Q	K	L	S	G	V	S	G	I	L	A
Query Conservation																								.
Alig confidence																								.
Template Conservation
Template Sequence		L	R	E	E	H	H	M	F	R	A	A	F	R	K	F	L	E	K	E	A	Y	P	H	Y	N	D	W	E	K	R	G	I	I	P	R	S	F	W	A	K	M	G	E	N	G	F	L	C	P	W	V	D	E	K	Y	G	G	L	N	A	D	F	A	Y	S	V	V	I	N	E	E	L	E	K	V	G	S	S	L	V
Template Known Secondary structure																					T	T	T	T								T	S												T	T		S	S	T	T	S		G	G	G	T																					G	G	G
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	V	G	V	P	N	S	L	G	P	G	E	L	L	Q	H	Y	G	T	D	E	Q	K	D	H	Y	L	P	R	L	A	R	G	Q	E	I	P	C	F	A	L	T	S	P	E	A	G	S	D	A	G	A	I	P	D	T	G	I	V	C	M	G	E	W	Q	G	Q	Q	V	L	G	M	R	L	T	W	N	K	R
Query Conservation
Alig confidence										.	.																																																						.	.	.	.	.	.	.	.
Template Conservation										.	.																																																						.	.	.	.	.	.	.	.
Template Sequence		G	I	G	L	H	N	D	I	.	.	V	T	P	Y	I	A	S	Y	G	T	E	E	Q	K	Q	K	W	L	P	K	C	V	T	G	E	L	I	T	A	I	A	M	T	E	P	G	A	G	S	D	L	A	N	I	S	T	T	A	V	K	D	G	D	.	.	.	.	.	.	.	.	Y	Y	I	V	N	G	Q	K	T
Template Known Secondary structure									T	.	.	T																							T	S	S								B	T	T	B	S	S		G	G	G									T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.																																																						.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150									.	.	.	.	.	.	.	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		Y	I	T	L	A	P	I	A	T	V	L	G	L	A	F	K	L	S	D	P	E	K	L	L	G	G	A	E	D	L	G	I	T	C	A	L	I	P	T	T	T	P	G	V	E	I	G	R	R	H	F	P	L	N	V	P	F	Q	.	N	G	P	T	R	G	K	D	V	F	V	P	I	D	Y	I	I	G	G	P	K
Query Conservation																																																												.
Alig confidence																								.	.	.	.																																	.																					.
Template Conservation																								.	.	.	.																																																						.
Template Sequence		F	I	T	N	G	I	H	A	D	L	I	V	V	A	C	K	T	D	P	Q	A	K	.	.	.	.	P	P	H	R	G	I	S	L	L	V	V	E	R	D	T	P	G	F	T	R	G	R	K	L	E	K	V	G	L	H	A	Q	D	T	A	E	L	F	F	Q	D	A	K	V	P	A	Y	N	L	L	G	E	E	.
Template Known Secondary structure				T	T	T	T	T		S								S		T	T		S	.	.	.	.	S	G	G	G	G								T	T		T	T										S	S		T	T	S														G	G	G			S	S	T	.
Template Predicted Secondary structure																								.	.	.	.																																																						.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.					.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	G	Q	G	W	R	M	L	V	E	C	L	S	V	G	R	G	I	T	L	P	S	N	S	T	G	G	V	K	S	V	A	L	A	T	G	A	Y	A	H	I	R	R	Q	F	K	I	S	I	G	K	M	E	G	I	E	E	P	L	A	R	I	A	G	N	A	Y	V	M	D	A	A	A	S	L	I	T	Y	G
Query Conservation
Alig confidence		.	.																.
Template Conservation		.	.																.
Template Sequence		.	.	G	K	G	F	Y	Y	L	M	E	K	L	Q	Q	E	R	.	L	V	V	A	I	A	A	Q	T	A	A	E	V	M	F	S	L	T	K	Q	Y	V	K	Q	R	T	A	F	G	K	R	V	S	E	F	Q	T	V	Q	F	R	L	A	E	M	A	T	E	I	A	L	G	R	T	F	V	D	R	V	I	E	E
Template Known Secondary structure		.	.	T															.																												T	T			G	G	G	S
Template Predicted Secondary structure		.	.																.
Template SS confidence
				235	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	L	G	E	K	P	A	V	L	S	A	I	V	K	Y	H	C	T	H	R	G	Q	Q	S	I	I	D	A	M	D	I	T	G	G	K	G	I	M	L	G	Q	S	N	F	L	A	R	A	Y	Q	G	A	P	I	A	I	T	V	E	G	A	N	I	L	T	R	S	M	M
Query Conservation
Alig confidence																																										.	.
Template Conservation																																										.	.
Template Sequence		H	M	A	G	K	Q	I	V	T	E	V	S	M	A	K	W	W	I	T	E	M	A	K	R	V	A	A	E	A	M	Q	L	H	G	G	Y	G	Y	M	E	.	.	E	Y	E	I	A	R	R	Y	R	D	I	P	V	S	A	I	Y	A	G	T	N	E	M	M	K	T	I	I
Template Known Secondary structure				T	T																													T	G	G	G	G	G		T	.	.	T	S									G	G	G	G	G	T	S	S	S
Template Predicted Secondary structure																																										.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.			.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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