Job Description Q47146 Confidence 100.00% Date Thu Jan 5 12:36:21 GMT 2012 Rank 4 Aligned Residues 401 % Identity 23% Template c2ix5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:acyl-coenzyme a oxidase 4, peroxisomal; PDBTitle: short chain specific acyl-coa oxidase from arabidopsis2 thaliana, acx4 in complex with acetoacetyl-coa Resolution 2.7 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	F	A	P	M	R	K	S	M	I	S	A	P	V	F	R	G	F	R	K	V	M	P	P	M	S	R	T	E	K	E	A	I	D	A	G	T	T	W	W	E	G	D	L	F	Q	G	K	P	D	W	K	K	L	H	N	Y	P	Q	P	R	L	T	A	E	E	Q	A	F	L	D	G	P	V	E	E	A	C	R
Query Conservation
Alig confidence											.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation											.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Sequence		F	D	L	P	P	M	E	M	S	.	V	A	F	P	Q	A	T	P	A	S	T	F	P	P	C	T	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	Y	H	F	N	D	L	L	T	P	E	E	Q	A	I	R	K	K	.	V	R	E	C	M	E
Template Known Secondary structure		S	S	S							.					S	S			T	T	S						S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		G	G	G	G	S											.
Template Predicted Secondary structure											.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template SS confidence
		21	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.																												.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.
		138		.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure			.				.
Query SS confidence			.				.
Query Sequence		M	.	A	N	D	.	F	Q	I	T	H	E	L	A	D	L	P	P	E	L	W	A	Y	L	K	E	H	R	F	F	A	M	I	I	K	K	E	Y	G	G	L	E	F	S	A	Y	A	Q	S	R	V	L	Q	K	L	S	G	V	S	G	I	L	A	I	T	V	G	V	P	N	S	L	G	P	G	E	L	L	Q	H
Query Conservation			.				.
Alig confidence			.				.																															.																																					.
Template Conservation																																						.																																					.
Template Sequence		K	E	V	A	P	I	M	T	E	Y	W	E	K	A	E	F	P	F	H	I	T	P	K	L	G	A	M	G	V	A	G	G	S	I	K	G	.	Y	G	C	P	G	L	S	I	T	A	N	A	I	A	T	A	E	I	A	R	V	D	A	S	C	S	T	F	I	L	V	H	S	S	L	G	.	M	L	T	I	A	L
Template Known Secondary structure				T											T				G	G	G						T	T	T		T	T	T	T			S	.	T	T																																T	T		.
Template Predicted Secondary structure																																						.																																					.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	T	D	E	Q	K	D	H	Y	L	P	R	L	A	R	G	Q	E	I	P	C	F	A	L	T	S	P	E	A	G	S	D	A	G	A	I	P	D	T	G	I	V	C	M	G	E	W	Q	G	Q	Q	V	L	G	M	R	L	T	W	N	K	R	Y	I	T	L	A	P	I	A	T	V	L	G	L	A	F	K	L
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.
Template Sequence		C	G	S	E	A	Q	K	E	K	Y	L	P	S	L	A	Q	L	N	T	V	A	C	W	A	L	T	E	P	D	N	G	S	D	A	S	G	L	G	T	T	A	T	K	V	E	G	.	.	.	.	.	.	.	.	G	W	K	I	N	G	Q	K	R	W	I	G	N	S	T	F	A	D	L	L	I	I	F	A	R	N
Template Known Secondary structure			S														T	T	S	S								B	T	T	B	S	S		G	G	G									T	T	.	.	.	.	.	.	.	.													T	T	T	T		S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.									.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		S	D	P	E	K	L	L	G	G	A	E	D	L	G	I	T	C	A	L	I	P	T	T	T	P	G	V	E	I	G	R	R	H	F	P	L	N	V	P	F	.	Q	N	G	P	T	R	G	K	D	V	F	V	P	I	D	Y	I	I	G	G	P	K	M	A	G	Q	G	W	R	M	L	V	E	C	L	S	V	G	R
Query Conservation																																										.
Alig confidence						.	.	.	.	.	.	.	.	.																												.																					.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.																																																	.	.	.	.
Template Sequence		T	T	T	N	.	.	.	.	.	.	.	.	.	Q	I	N	G	F	I	V	K	K	D	A	P	G	L	K	A	T	K	I	P	N	K	I	G	L	R	M	V	Q	N	G	D	I	L	L	Q	N	V	F	V	P	D	E	D	R	L	P	G	.	.	.	.	V	N	S	F	Q	D	T	S	K	V	L	A	V	S	R
Template Known Secondary structure		T	T	T	S	.	.	.	.	.	.	.	.	.	S								T	T		T	T										S	S	S	T	T	S														G	G	G	B		T	T	.	.	.	.		S	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.																																																	.	.	.	.
Template SS confidence
		222	.	.	.										.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.					.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	T	L	P	S	N	S	T	G	G	V	K	S	V	A	L	A	T	G	A	Y	A	H	I	R	R	Q	F	K	I	S	I	G	K	M	E	G	I	E	E	P	L	A	R	I	A	G	N	A	Y	V	M	D	A	A	A	S	L	I	T	Y	G	I	M	L	G	E	K	P	A	V	L	S	A	I	V	K	Y	H
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	V	M	V	A	W	Q	P	I	G	I	S	M	G	I	Y	D	M	C	H	R	Y	L	K	E	R	K	Q	F	G	A	P	L	A	A	F	Q	L	N	Q	Q	K	L	V	Q	M	L	G	N	V	Q	A	M	F	L	M	G	W	R	L	C	K	L	Y	E	T	G	Q	M	T	P	G	Q	A	S	L	G	K	A	W
Template Known Secondary structure		.																												T	T			G	G	G	S																														T	T
Template Predicted Secondary structure		.
Template SS confidence
			289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.				.	.	510	.	.	.
Predicted Secondary structure																																																							.	.	.
Query SS confidence																																																							.	.	.
Query Sequence		C	T	H	R	G	Q	Q	S	I	I	D	A	M	D	I	T	G	G	K	G	I	M	L	G	Q	S	N	F	L	A	R	A	Y	Q	G	A	P	I	A	I	T	V	E	G	A	N	I	L	T	R	S	M	M	.	.	.	I	F	G	Q	G	A
Query Conservation																																																							.	.	.
Alig confidence																									.	.																													.	.	.
Template Conservation																									.	.
Template Sequence		I	S	S	K	A	R	E	T	A	S	L	G	R	E	L	L	G	G	N	G	I	L	A	.	.	D	F	L	V	A	K	A	F	C	D	L	E	P	I	Y	T	Y	E	G	T	Y	D	I	N	T	L	V	T	G	R	E	V	T	G	I	A	S
Template Known Secondary structure																	T	G	G	G	G	G		G	.	.	G	G	S														S	S	S															S
Template Predicted Secondary structure																									.	.
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390			.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.