Job Description Q47146 Confidence 100.00% Date Thu Jan 5 12:36:21 GMT 2012 Rank 29 Aligned Residues 365 % Identity 25% Template c2ebaI_ PDB info PDB header:oxidoreductase Chain: I: PDB Molecule:putative glutaryl-coa dehydrogenase; PDBTitle: crystal structure of the putative glutaryl-coa dehydrogenase from2 thermus thermophilus Resolution 2.21 Å

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		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		P	R	L	T	A	E	E	Q	A	F	L	D	G	P	V	E	E	A	C	R	M	A	N	D	F	.	Q	I	T	H	E	L	A	D	L	P	P	E	L	W	A	Y	L	K	E	H	R	F	F	A	M	I	I	K	K	E	Y	G	G	L	E	F	S	A	Y	A	Q	S	R	V	L	Q	K	L	S	G	V	S	G	I
Query Conservation																											.
Alig confidence																											.
Template Conservation
Template Sequence		D	L	L	T	P	E	E	K	E	V	Q	K	A	A	R	R	F	L	E	K	E	A	L	P	H	I	R	D	W	W	E	E	G	V	F	P	T	H	L	I	P	R	F	A	E	L	G	F	L	G	P	T	L	P	P	E	Y	G	G	A	G	V	S	S	A	A	Y	G	L	I	C	Y	E	L	E	R	V	D	S	G
Template Known Secondary structure		G	G	S																			T										T	T				T	T									T		S	S	T	T	S		G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	I	T	V	G	V	P	N	S	L	G	P	G	E	L	L	Q	H	Y	G	T	D	E	Q	K	D	H	Y	L	P	R	L	A	R	G	Q	E	I	P	C	F	A	L	T	S	P	E	A	G	S	D	A	G	A	I	P	D	T	G	I	V	C	M	G	E	W	Q	G	Q	Q	V	L	G	M	R	L	T	W	N
Query Conservation
Alig confidence														.																																														.							.	.	.	.	.	.	.	.
Template Conservation														.																																														.							.	.	.	.	.	.	.	.
Template Sequence		L	R	S	F	V	S	V	Q	S	S	L	V	.	M	Y	P	I	Y	A	Y	G	S	E	E	Q	K	R	E	F	L	P	K	L	A	R	G	E	M	V	G	C	F	G	L	T	E	P	D	G	G	S	D	P	Y	G	N	M	K	.	T	R	A	R	R	D	.	.	.	.	.	.	.	.	T	W	V	L	N	G	T
Template Known Secondary structure												T	T	.																						T	T	S	S									T	T		T	T	S	T	T	T	T			.							.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.																																														.							.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.									.	.	.	.	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		K	R	Y	I	T	L	A	P	I	A	T	V	L	G	L	A	F	K	L	S	D	P	E	K	L	L	G	G	A	E	D	L	G	I	T	C	A	L	I	P	T	T	T	P	G	V	E	I	G	R	R	H	F	P	L	N	V	P	F	.	Q	N	G	P	T	R	G	K	D	V	F	V	P	I	D	Y	I	I	G	G
Query Conservation																																																													.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	M	W	I	T	N	G	N	L	A	H	L	A	V	I	W	A	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	L	G	F	L	V	P	T	D	T	P	G	F	Q	A	R	E	V	K	R	K	M	S	L	R	A	S	V	T	S	E	L	V	L	E	E	V	R	V	P	E	S	L	R	L	P	K
Template Known Secondary structure							T	T	T	T		S									.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	S	T	T								S		S	S	S		S	S														G	G	G
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.														180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	M	A	G	Q	G	W	R	M	L	V	E	C	L	S	V	G	R	G	I	T	L	P	S	N	S	T	G	G	V	K	S	V	A	L	A	T	G	A	Y	A	H	I	R	R	Q	F	K	I	S	I	G	K	M	E	G	I	E	E	P	L	A	R	I	A	G	N	A	Y	V	M	D	A	A	A	S	L	I	T
Query Conservation
Alig confidence		.	.	.	.																.
Template Conservation		.	.	.	.																.
Template Sequence		.	.	.	.	A	L	G	L	K	A	P	L	S	C	L	T	Q	A	R	.	F	G	I	A	W	G	A	M	G	A	L	E	A	V	Y	E	E	A	V	A	F	A	K	S	R	S	T	F	G	E	P	L	A	K	K	Q	L	V	Q	A	K	L	A	E	M	L	A	W	H	T	E	G	L	L	L	A	W	R	L	A
Template Known Secondary structure		.	.	.	.			S	T												.																										B	S	S	S	S	B	G	G	G	S
Template Predicted Secondary structure		.	.	.	.																.
Template SS confidence
						231	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	I	M	L	G	E	K	P	A	V	L	S	A	I	V	K	Y	H	C	T	H	R	G	Q	Q	S	I	I	D	A	M	D	I	T	G	G	K	G	I	M	L	G	Q	S	N	F	L	A	R	A	Y	Q	G	A	P	I	A	I	T	V	E	G	A	N	I	L	T	R	S	M	M	I	F	G	Q	G	A	I
Query Conservation
Alig confidence																																												.	.																													.	.
Template Conservation																																												.	.																													.	.
Template Sequence		R	L	K	D	E	G	K	L	T	P	A	Q	V	S	L	A	K	R	Q	N	V	W	K	A	L	Q	A	A	R	M	A	R	D	I	L	G	G	S	G	I	T	L	.	.	E	Y	H	A	I	R	H	M	L	N	L	E	T	V	Y	T	Y	E	G	T	H	D	V	H	T	L	V	L	.	.	G	R	E	I	T
Template Known Secondary structure						T	T																														G	G	G	G	G	S	T	.	.	T	S	S												T	T	S	S	S										.	.
Template Predicted Secondary structure																																												.	.																													.	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.			.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.			.	.	.	.	380

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions