Job Description Q47146 Confidence 100.00% Date Thu Jan 5 12:36:21 GMT 2012 Rank 19 Aligned Residues 378 % Identity 25% Template c2cx9C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl-coa dehydrogenase Resolution 2.00 Å

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		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		R	L	T	A	E	E	Q	A	F	L	D	G	P	V	E	E	A	C	R	M	A	.	.	N	D	F	Q	I	T	H	E	L	A	D	L	P	P	E	L	W	A	Y	L	K	E	H	R	F	F	A	M	I	I	K	K	E	Y	G	G	L	E	F	S	A	Y	A	Q	S	R	V	L	Q	K	L	S	G	V	S	G	I
Query Conservation																							.	.
Alig confidence														.									.	.
Template Conservation														.
Template Sequence		E	E	G	A	E	E	R	Q	V	L	G	P	.	F	R	E	F	L	K	A	E	V	A	P	G	A	A	E	R	D	R	T	G	A	F	P	W	D	L	V	R	K	L	A	E	F	G	V	F	G	A	L	V	P	E	A	Y	G	G	A	G	L	S	T	R	L	F	A	R	M	V	E	A	I	A	Y	Y	D	G	A
Template Known Secondary structure		S												.									T	S	T	T																				T	T	T	T	T	S	T	T	S		G	G	G	T	S
Template Predicted Secondary structure														.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	I	T	V	G	V	P	N	S	L	G	P	G	E	L	L	Q	H	Y	G	T	D	E	Q	K	D	H	Y	L	P	R	L	A	R	G	Q	E	I	P	C	F	A	L	T	S	P	E	A	G	S	D	A	G	A	I	P	D	T	G	I	V	C	M	G	E	W	Q	G	Q	Q	V	L	G	M	R	L	T	W	N
Query Conservation
Alig confidence														.																																																					.	.	.	.	.	.	.	.
Template Conservation														.																																																					.	.	.	.	.	.	.	.
Template Sequence		L	A	L	T	V	A	S	H	N	S	L	A	.	T	G	H	I	L	L	A	G	S	E	A	Q	K	E	A	F	L	P	K	L	A	S	G	E	A	L	G	A	W	G	L	T	E	P	G	S	G	S	D	A	A	A	L	K	T	K	A	E	K	V	E	G	.	.	.	.	.	.	.	.	G	W	R	L	N	G	T
Template Known Secondary structure												T		.																					T	T	T	S	S									S	S		S	S		G	G	G									T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.																																																					.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.									.	150	.	.	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		K	R	Y	I	T	L	A	P	I	A	T	V	L	G	L	A	F	K	L	S	D	P	E	K	L	L	G	G	A	E	D	L	G	I	T	C	A	L	I	P	T	T	T	P	G	V	E	I	G	R	R	H	F	P	L	N	V	P	F	Q	.	N	G	P	T	R	G	K	D	V	F	V	P	I	D	Y	I	I	G	G
Query Conservation																																																														.
Alig confidence																										.	.																																			.
Template Conservation																										.	.
Template Sequence		K	Q	F	I	T	Q	G	S	V	A	G	V	Y	V	V	M	A	R	T	D	P	P	P	S	.	.	P	E	R	K	H	Q	G	I	S	A	F	A	F	F	R	P	E	R	G	L	K	V	G	R	K	E	E	K	L	G	L	T	A	S	D	T	A	Q	L	I	L	E	D	L	F	V	P	E	E	A	L	L	G	E
Template Known Secondary structure							T	S	S	S											S			S	S	.	.	S	S		T	T	T	T										S	S	S										S	S		T	T	S														G	G	G			S	S
Template Predicted Secondary structure																										.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	M	A	G	Q	G	W	R	M	L	V	E	C	L	S	V	G	R	G	I	T	L	P	S	N	S	T	G	G	V	K	S	V	A	L	A	T	G	A	Y	A	H	I	R	R	Q	F	K	I	S	I	G	K	M	E	G	I	E	E	P	L	A	R	I	A	G	N	A	Y	V	M	D	A	A	A	S	L	I	T
Query Conservation
Alig confidence			.	.	.																.
Template Conservation			.	.	.																.
Template Sequence		R	.	.	.	G	K	G	F	Y	D	V	L	R	V	L	D	G	G	R	.	I	G	I	A	A	M	A	V	G	L	G	Q	A	A	L	D	Y	A	L	A	Y	A	K	G	R	E	A	F	G	R	P	I	A	E	F	E	G	V	S	F	K	L	A	E	A	A	T	E	L	E	A	A	R	L	L	Y	L	K	A	A
Template Known Secondary structure		T	.	.	.	T															.																												T	T			G	G	G	S
Template Predicted Secondary structure			.	.	.																.
Template SS confidence
		234				.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	I	M	L	G	E	K	P	A	V	L	S	A	I	V	K	Y	H	C	T	H	R	G	Q	Q	S	I	I	D	A	M	D	I	T	G	G	K	G	I	M	L	G	Q	S	N	F	L	A	R	A	Y	Q	G	A	P	I	A	I	T	V	E	G	A	N	I	L	T	R	S	M	M	I	F	G	Q	G	A	I	R
Query Conservation
Alig confidence																																												.	.																													.	.
Template Conservation																																												.	.																													.	.
Template Sequence		E	L	K	D	A	G	R	P	F	T	L	E	A	A	Q	A	K	L	F	A	S	E	A	A	V	K	A	C	D	E	A	I	Q	I	L	G	G	Y	G	Y	V	K	.	.	D	Y	P	V	E	R	Y	W	R	D	A	R	L	T	R	I	G	E	G	T	S	E	I	L	K	L	V	I	.	.	A	R	R	L	L	E
Template Known Secondary structure						T	T																													T	G	G	G	G	G	S	T	.	.	T	S	T										G	G	G	T	T	T	S										.	.
Template Predicted Secondary structure																																												.	.																													.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.			.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.			380	.	.	.	.	.
		516
Predicted Secondary structure
Query SS confidence
Query Sequence		C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		386

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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