Job Description Q47146 Confidence 100.00% Date Thu Jan 5 12:36:21 GMT 2012 Rank 25 Aligned Residues 374 % Identity 23% Template c1bucB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:butyryl-coa dehydrogenase; PDBTitle: three-dimensional structure of butyryl-coa dehydrogenase from2 megasphaera elsdenii Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.				180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																					.	.																																											.	.	.
Query SS confidence																					.	.																																											.	.	.
Query Sequence		R	L	T	A	E	E	Q	A	F	L	D	G	P	V	E	E	A	C	R	.	.	M	A	N	D	F	Q	I	T	H	E	L	A	D	L	P	P	E	L	W	A	Y	L	K	E	H	R	F	F	A	M	I	I	K	K	E	Y	G	G	L	E	F	S	.	.	.	A	Y	A	Q	S	R	V	L	Q	K	L	S	G	V
Query Conservation																					.	.																																											.	.	.
Alig confidence														.							.	.																																											.	.	.
Template Conservation														.
Template Sequence		N	L	T	D	I	Q	Q	D	F	L	K	L	.	A	H	D	F	G	E	K	K	L	A	P	T	V	T	E	R	D	H	K	G	I	Y	D	K	E	L	I	D	E	L	L	S	L	G	I	T	G	A	Y	F	E	E	K	Y	G	G	S	G	D	D	G	G	D	V	L	S	Y	I	L	A	V	E	E	L	A	K	Y
Template Known Secondary structure														.								T												T													T	S	G	G	G	T	T	S		G	G	G	T		S	G	G	G	T
Template Predicted Secondary structure														.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	I	L	A	I	T	V	G	V	P	N	S	L	G	P	G	E	L	L	Q	H	Y	G	T	D	E	Q	K	D	H	Y	L	P	R	L	A	R	G	Q	E	I	P	C	F	A	L	T	S	P	E	A	G	S	D	A	G	A	I	P	D	T	G	I	V	C	M	G	E	W	Q	G	Q	Q	V	L	G	M	R	L
Query Conservation
Alig confidence																	.																																																						.	.	.	.	.	.	.
Template Conservation																	.																																																						.	.	.	.	.	.	.
Template Sequence		D	A	G	V	A	I	T	L	S	A	T	V	S	L	C	.	A	N	P	I	W	Q	F	G	T	E	A	Q	K	E	K	F	L	V	P	L	V	E	G	T	K	L	G	A	F	G	L	T	E	P	N	A	G	T	D	A	S	G	Q	Q	T	I	A	T	K	N	D	D	G	.	.	.	.	.	.	.	T	Y	T	L
Template Known Secondary structure																T	.																							T	S	S								B	T	T	B	S	S	S	T	T										T	T	S	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.																																																						.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150								.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		T	W	N	K	R	Y	I	T	L	A	P	I	A	T	V	L	G	L	A	F	K	L	S	D	P	E	K	L	L	G	G	A	E	D	L	G	I	T	C	A	L	I	P	T	T	T	P	G	V	E	I	G	R	R	H	F	P	L	N	V	P	F	.	Q	N	G	P	T	R	G	K	D	V	F	V	P	I	D	Y	I
Query Conservation																																																																.
Alig confidence																										.	.	.	.	.	.																																	.
Template Conservation																										.	.	.	.	.	.
Template Sequence		N	G	S	K	I	F	I	T	N	G	G	A	A	D	I	Y	I	V	F	A	M	T	D	K	.	.	.	.	.	.	S	K	G	N	H	G	I	T	A	F	I	L	E	D	G	T	P	G	F	T	Y	G	K	K	E	D	K	M	G	I	H	T	S	Q	T	M	E	L	V	F	Q	D	V	K	V	P	A	E	N	M
Template Known Secondary structure										T	T	T	T		S								S		S	.	.	.	.	.	.	S	S	S	T	T									T	T		T	T										S	S		T	T	S														G	G	G
Template Predicted Secondary structure																										.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.							.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	G	P	K	M	A	G	Q	G	W	R	M	L	V	E	C	L	S	V	G	R	G	I	T	L	P	S	N	S	T	G	G	V	K	S	V	A	L	A	T	G	A	Y	A	H	I	R	R	Q	F	K	I	S	I	G	K	M	E	G	I	E	E	P	L	A	R	I	A	G	N	A	Y	V	M	D	A	A	A	S
Query Conservation
Alig confidence						.	.	.																.
Template Conservation						.	.	.																.
Template Sequence		L	G	E	E	.	.	.	G	K	G	F	K	I	A	M	M	T	L	D	G	G	R	.	I	G	V	A	A	Q	A	L	G	I	A	E	A	A	L	A	D	A	V	E	Y	S	K	Q	R	V	Q	F	G	K	P	L	C	K	F	Q	S	I	S	F	K	L	A	D	M	K	M	Q	I	E	A	A	R	N	L	V	Y
Template Known Secondary structure			S		T	.	.	.	T															.																												T	T			G	G	G	S
Template Predicted Secondary structure						.	.	.																.
Template SS confidence
		229	230	.	.				.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	T	Y	G	I	M	L	G	E	K	P	A	V	L	S	A	I	V	K	Y	H	C	T	H	R	G	Q	Q	S	I	I	D	A	M	D	I	T	G	G	K	G	I	M	L	G	Q	S	N	F	L	A	R	A	Y	Q	G	A	P	I	A	I	T	V	E	G	A	N	I	L	T	R	S	M	M	I	F	G	Q	G
Query Conservation
Alig confidence																																															.	.																													.	.
Template Conservation																																															.	.																													.	.
Template Sequence		K	A	A	C	K	K	Q	E	G	K	P	F	T	V	D	A	A	I	A	K	R	V	A	S	D	V	A	M	R	V	T	T	E	A	V	Q	I	F	G	G	Y	G	Y	S	E	.	.	E	Y	P	V	A	R	H	M	R	D	A	K	I	T	Q	I	Y	E	G	T	N	E	V	Q	L	M	V	T	.	.	G	G	A
Template Known Secondary structure										T																													T	G	G	G	G	G	S	T	.	.	T	S										G	G	G	G	T	S	S	S										.	.
Template Predicted Secondary structure																																															.	.																													.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.			350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.			.	.	380
		513	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	R
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		381	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions