Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9K3
Confidence95.33%DateThu Jan 5 11:10:33 GMT 2012
Rank256Aligned Residues150
% Identity18%Templatec3dmdA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.........150.........160.........170.........180.........190.........200.........210...
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Query Sequence  DHDITFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVE
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Template Sequence  KPYVIMFVGFNGSGKTTTIAKLANWLKNHGF. SVVIAASDTFRAG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . AIEQLE
Template Known Secondary structure  S


TTSSTT
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TT
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   122.......130.........140.........150.. .......160..... ....170.
 
   214.....220.........230. ........240.... .....250.........260.........270......
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Query Sequence  KLIERNVIEVAPLAYMRG. . . . . . . . . . . . RTLNDAFIILDES. . . . . QNTTIEQMKMFLTRIGFNSKAVITGDVTQIDL
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Template Sequence  EHAKRIGVKVIKHSYGADPAAVAYDAIQHAKARGIDVVLIDTAGRSETNRNLMDEMKKIARVTKPN. LVIFVGDALA. . .
Template Known Secondary structure  TT


STT

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S.TT
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   172.......180.........190.........200.........210.........220.........230....... ..240.......
 
   277..280.........290.........300.........310.........320
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Query Sequence  PRNTKSGLRHAIEVLADVEEISFNFFHSEDVVRHPVVARIVNAY
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Template Sequence  . . . GNAIVEQARQFNEAVKIDGIILTKLDADARGGAALSISYVI
Template Known Secondary structure  ...TTTS


SGGG
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   248.250.........260.........270.........280........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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