256 c3dmdA_ Probab=95.33   E-value=0.23  Score=28.27  Aligned_columns=150  Identities=18%

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf             58818997278876379999999999970996389997268278653121368878978888998999999862978899
Q batch____       134 DHDITFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVE  213 (346)
Q Consensus       134 ~~~iv~~~GpAGTGKT~la~a~a~~~l~~~~~~rIil~RP~v~ag~~lGfLPGd~~eK~~pyl~pl~d~L~~~~~~~~~~  213 (346)
                      .+.++.++||+|.|||.++...|..+..++. +=.+++--+-.+|                             ..++++
T Consensus       114 ~~~Vi~~~G~~G~GKttt~~kla~~~~~~g~-~v~~i~~D~~r~~-----------------------------a~~qL~  163 (310)
T c3dmdA_         114 KPYVIMFVGFNGSGKTTTIAKLANWLKNHGF-SVVIAASDTFRAG-----------------------------AIEQLE  163 (310)
T ss_dssp             SCEEEEEECCTTSSHHHHHHHHHHHHHHTTC-CEEEEEECTTCHH-----------------------------HHHHHH
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHCCC-CEEEEECCCCCCC-----------------------------HHHHHH
T ss_conf             8549999737876412289999999996699-2899973886700-----------------------------799999


Q ss_pred             HHHHCCCEEEECCHHCCC------------CCCCCCEEEEECC-----CCCCHHHHHHHHHHCCCCCEEEEECCCHHHCC
Q ss_conf             998469779950101058------------7447768999660-----24999999999986199976999778035138
Q batch____       214 KLIERNVIEVAPLAYMRG------------RTLNDAFIILDES-----QNTTIEQMKMFLTRIGFNSKAVITGDVTQIDL  276 (346)
Q Consensus       214 ~~~~~~~iei~pl~ymRG------------Rtl~~~~iIiDEA-----Qn~t~~~mk~~LTR~g~~skiVi~GD~~QiDl  276 (346)
                      .+-+.-.+.+.....-..            +.-+..+|+||-|     ..-...+|+.++.-+... .++++-|.+.   
T Consensus       164 ~~a~~~~v~~~~~~~~~d~~~~~~~~~~~~~~~~~d~ilIDTaGr~~~~~~~~~el~~~~~~~~~~-~~~lvl~a~~---  239 (310)
T c3dmdA_         164 EHAKRIGVKVIKHSYGADPAAVAYDAIQHAKARGIDVVLIDTAGRSETNRNLMDEMKKIARVTKPN-LVIFVGDALA---  239 (310)
T ss_dssp             HHHHHTTCEEECCSTTCCHHHHHHHHHHHHHHHTCSEEEEEECSSCCSSSCHHHHHHHHHHHHCCS-EEEEEEETTC---
T ss_pred             HHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCC-EEEEECCCCC---
T ss_conf             999972991796388799899999999999977997999818878899989999999999522933-1999704677---


Q ss_pred             CCCCCCHHHHHHHHHCCCCCCEEEEECCCCEECCHHHHHHHHHH
Q ss_conf             88877708999999648997169980523001027899999998
Q batch____       277 PRNTKSGLRHAIEVLADVEEISFNFFHSEDVVRHPVVARIVNAY  320 (346)
Q Consensus       277 p~~~~sGL~~a~~~l~~~~~i~~i~~~~~DiVR~~~v~~iv~ay  320 (346)
                         ..+.+..+......++--++|-=--+.--|-+-+-.++.++
T Consensus       240 ---~~~~~~~~~~~~~~~~~~~~i~TKlDe~~~~G~~l~~~~~~  280 (310)
T c3dmdA_         240 ---GNAIVEQARQFNEAVKIDGIILTKLDADARGGAALSISYVI  280 (310)
T ss_dssp             ---TTTHHHHHHHHHHHSCCCEEEEESGGGCSSCHHHHHHHHHH
T ss_pred             ---CHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHH
T ss_conf             ---57999999998631899779997454788557999999984