Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9K3
Confidence96.81%DateThu Jan 5 11:10:33 GMT 2012
Rank160Aligned Residues97
% Identity28%Templatec1s3sA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:transitional endoplasmic reticulum atpase (ter PDBTitle: crystal structure of aaa atpase p97/vcp nd1 in complex with2 p47 c
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   138.140.........150.........160.........170.........180.........190.........200.........210.......
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Query Sequence  TFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIE
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Template Sequence  ILLYGPPGTGKTLIARAVANET. . . . . GAFFFL. . . . INGPEIMSKLAGESESNLRKAFE. . . . . . . . . . . . . . . . . . . .
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STTSS.....T
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   241........250.........260.. ...... .270.........280.........290.
 
   218.220.........230.........240....... ..250.........260......... 270.....
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Query Sequence  RNVIEVAPLAYMRGRTLNDAFIILDESQNT. . . . . . . . . . . . . . TIEQMKMFLTRIGFNSKAVITG. . . DVTQID
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Template Sequence  . . . . . . . . . . . . EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID
Template Known Secondary structure  ............T
STGGGT


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GGG
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   292.......300.........310.........320.........330.........340.........350....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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