160 c1s3sA_ Probab=96.81   E-value=0.012  Score=35.99  Aligned_columns=97  Identities=28%

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf             89972788763799999999999709963899972682786531213688789788889989999998629788999984
Q batch____       138 TFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIE  217 (346)
Q Consensus       138 v~~~GpAGTGKT~la~a~a~~~l~~~~~~rIil~RP~v~ag~~lGfLPGd~~eK~~pyl~pl~d~L~~~~~~~~~~~~~~  217 (346)
                      +++.||+|||||+++-+.|-.+     ...++.    +.+++-.+-.+|....++.-.+.                    
T Consensus       219 ~Ll~Gp~G~GKt~l~~~ia~~~-----~~~~~~----i~~~~l~~~~~g~~e~~l~~~f~--------------------  269 (436)
T c1s3sA_         219 ILLYGPPGTGKTLIARAVANET-----GAFFFL----INGPEIMSKLAGESESNLRKAFE--------------------  269 (436)
T ss_dssp             EEEECSTTSSHHHHHHHHHHHH-----TCEEEE----EEHHHHHTSCTTHHHHHHHHHHH--------------------
T ss_pred             EEEECCCCCCHHHHHHHHHHHC-----CCCEEE----EEHHHHCCCCCCHHHHHHHHHHH--------------------
T ss_conf             8986799899789999998744-----995899----73068700100158888999999--------------------


Q ss_pred             CCCEEEECCHHCCCCCCCCCEEEEECCCCC--------------CHHHHHHHHHHCCCCCEEEEEC---CCHHHC
Q ss_conf             697799501010587447768999660249--------------9999999998619997699977---803513
Q batch____       218 RNVIEVAPLAYMRGRTLNDAFIILDESQNT--------------TIEQMKMFLTRIGFNSKAVITG---DVTQID  275 (346)
Q Consensus       218 ~~~iei~pl~ymRGRtl~~~~iIiDEAQn~--------------t~~~mk~~LTR~g~~skiVi~G---D~~QiD  275 (346)
                                  +-+...-++|++||.-.+              ...++.+++..+..++++++.|   ++..+|
T Consensus       270 ------------~a~~~~p~ii~lDeid~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vi~tt~~~~~l~  332 (436)
T c1s3sA_         270 ------------EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID  332 (436)
T ss_dssp             ------------HHHHTCSEEEEEETGGGTCCCSSSCCCTTHHHHHHHHHHHHHHCCGGGCEEEEEEESCGGGSC
T ss_pred             ------------HHHHCCCCEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHCC
T ss_conf             ------------997509948984000032102578874588999999986430222469879998448958888