Return to main results Retrieve Phyre Job Id

Job DescriptionQ59385
Confidence58.85%DateThu Jan 5 12:37:17 GMT 2012
Rank246Aligned Residues116
% Identity11%Templated1tqxa_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel D-ribulose-5-phosphate 3-epimerase
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   648.650.........660.........670.... .....680.........690...... ...700.........710.....
Predicted Secondary structure 










..








..........



Query SS confidence 


























. .





















. . . . . . . . . .


















Query Sequence  RDPLRSDSVAALQRLHKAGYRLVMLTG. . DNPTTANAIAKEAGIDEVIAGV. . . . . . . . . . LPDGKAEAIKHLQSEGRQV
Query Conservation   
 

  
   
  
   

 
 



..
   

  

  


  
 
  .......... 
  
   
  

  
  
Alig confidence 


























..





















..........


















Template Conservation                    
    
 
   
              
 
                     
           
Template Sequence  LNEDTERCIQLAKEIRDNNLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYKNLN
Template Known Secondary structure  GTT
TTT

TTS
GGGGTTT

SSS
TT
SS



GGG
TT
Template Predicted Secondary structure 





























Template SS confidence 















































































   96...100.........110.........120.........130.........140.........150.........160.........170.....
 
   716...720.........730.........740.........750.........760.........770......
Predicted Secondary structure 











Query SS confidence 




























































Query Sequence  AMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLHNMKQ
Query Conservation   











  





   


 
   




    
  
   
 


     
  
Alig confidence 







.............







































Template Conservation 
   


 .............          


 






    

      
   
  
Template Sequence  IQVDGGLN. . . . . . . . . . . . . IETTEISASHGANIIVAGTSIFNAEDPKYVIDTMRVSVQK
Template Known Secondary structure  SS

.............T

ST
SS
Template Predicted Secondary structure 



.............







Template SS confidence 




























































   176...180... ......190.........200.........210.........220...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions