 |
Job Description | Q59385 | Confidence | 99.34% | Date | Thu Jan 5 12:37:17 GMT 2012 |
Rank | 40 | Aligned Residues | 75 |
% Identity | 27% | Template | d1kvja_ |
SCOP info | Ferredoxin-like
| HMA, heavy metal-associated domain
| HMA, heavy metal-associated domain
|
Resolution | UNK |
|
 |
  |   |
93 | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | |
|
|
. | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | T | A | D | D | D | D | S | Q | Q | L | L | L | S | G | M | S | C | A | S | C | V | T | R | V | Q | N | A | L | Q | S | V | P | G | V | T | Q | A | R | V | N | L | A | E | R | T | A | L | V | M | G | S | A | . |
. |
. |
S | P | Q | D | L | V | Q | A | V | E | K | A | G | Y | G | A | E | A | I | E | D | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |
|
|   |   |   |   |
|
|   |   |
|   |   |   |   |
|   |   |
|   | . | . | . |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |
|
Template Sequence |   |
D | P | S | M | G | V | N | S | V | T | I | S | V | E | G | M | T | C | N | S | C | V | W | T | I | E | Q | Q | I | G | K | V | N | G | V | H | H | I | K | V | S | L | E | E | K | N | A | T | I | I | Y | D | P | K | L | Q | T | P | K | T | L | Q | E | A | I | D | D | M | G | F | D | A | V | I | H | N | P | D |
Template Known Secondary structure |   |
| S | S | T | T |
|  |  |  |  |  |  |  |  | S |
|
| S | T |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |
| S |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |
| T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |
| S |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|