 |
Job Description | Q59385 | Confidence | 51.86% | Date | Thu Jan 5 12:37:17 GMT 2012 |
Rank | 259 | Aligned Residues | 83 |
% Identity | 23% | Template | d1ccwa_ |
SCOP info | Flavodoxin-like
| Cobalamin (vitamin B12)-binding domain
| Cobalamin (vitamin B12)-binding domain
|
Resolution | 1.60 |
|
 |
  |   |
625 | . | . | . | . | 630 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | |
|
. | 670 | . | . | . | . | |
|
|
|
|
|
. | . | . | . | . | 680 | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . |  |  |  |  |
|
| . | . | . | . | . | . |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | A | S | Q | G | A | T | P | V | L | L | A | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | G | K | A | V | A | L | L | A | V | R | D | P | L | R | S | D | S | V | A | A | L | Q | R | L | H | K | A | G | Y | R | . |
. |
L | V | M | L | T | G | . |
. |
. |
. |
. |
. |
D | N | P | T | T | A | N | A |
Query Conservation |   |
  |   |   |   |
|   |   |   |
|   |
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |
|   |
|   |
|   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   | . | . |
|   |
|
|
|
| . | . | . | . | . | . |
|   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
F | T | N | A | G | F | N | V | V | N | I | G | V | L | S | P | Q | E | L | F | I | K | A | A | I | E | T | K | A | D | A | I | L | V | S | S | L | Y | G | Q | G | E | I | D | C | K | G | L | R | Q | K | C | D | E | A | G | L | E | G | I | L | L | Y | V | G | G | N | I | V | V | G | K | Q | H | W | P | D | V | E | K |
Template Known Secondary structure |   |
 |  |  | T | T |
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  |
| S | S | T |  |  |  |  |  | T | T |  |  |  |  |  |  |  | T | T |
| T | T |
|  |  |  |  |  |  | S |
| S | S | S | S |
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
  |
  |   |
683 | . | . | . | . | . | . | 690 | . | . | . | . | |
. | . | . | . | . | 700 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | K | E | A | G | I | D | E | V | I | A | . |
G | V | L | P | D | G | K | A | E | A | I | K | H |
Query Conservation |   |
|
|   |   |
|
|
|   |   |
|   |
| . |   |   |   |
|   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |
|   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |
|
|   |
Template Sequence |   |
R | F | K | D | M | G | Y | D | R | V | Y | A | P | G | T | P | P | E | V | G | I | A | D | L | K | K |
Template Known Secondary structure |   |
 |  |  |  | T | T |
| S |  |  |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|