Job Description Q59385 Confidence 100.00% Date Thu Jan 5 12:37:17 GMT 2012 Rank 2 Aligned Residues 650 % Identity 45% Template c3rfuC_ PDB info PDB header:hydrolase, membrane protein Chain: C: PDB Molecule:copper efflux atpase; PDBTitle: crystal structure of a copper-transporting pib-type atpase Resolution 3.20 Å

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		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		T	M	K	R	F	R	W	Q	A	I	V	A	L	A	V	G	I	P	V	M	V	W	G	M	I	G	D	N	M	M	V	T	A	D	N	R	S	L	W	L	V	I	G	L	I	T	L	A	V	M	V	F	A	G	G	H	F	Y	R	S	A	W	K	S	L	L	N	G	A	A	T	M	D	T	L	V	A	L	G	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Y	L	D	M	R	R	R	F	W	I	A	L	M	L	T	I	P	V	V	I	L	E	M	G	G	H	G	L	K	H	F	I	S	G	N	G	S	S	W	I	Q	L	L	L	A	T	P	V	V	L	W	G	G	W	P	F	F	K	R	G	W	Q	S	L	K	T	G	Q	L	N	M	F	T	L	I	A	M	G	I
Template Known Secondary structure																										S				T	T	S	S		S	T	T																T	T	T												T	T	S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.							.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.																																																			.
Query SS confidence																				.	.	.	.	.	.																																																			.
Query Sequence		G	V	A	W	L	Y	S	M	S	V	N	L	W	P	Q	W	F	P	.	.	.	.	.	.	M	E	A	R	H	L	Y	Y	E	A	S	A	M	I	I	G	L	I	N	L	G	H	M	L	E	A	R	A	R	Q	R	S	S	K	A	L	E	K	L	L	D	L	T	P	P	T	A	R	L	V	.	T	D	E	G	E
Query Conservation																				.	.	.	.	.	.																																																			.
Alig confidence																				.	.	.	.	.	.																																																			.
Template Conservation
Template Sequence		G	V	A	W	I	Y	S	M	V	A	V	L	W	P	G	V	F	P	H	A	F	R	S	Q	E	G	V	V	A	V	Y	F	E	A	A	A	V	I	T	T	L	V	L	L	G	Q	V	L	E	L	K	A	R	E	Q	T	G	S	A	I	R	A	L	L	K	L	V	P	E	S	A	H	R	I	K	E	D	G	S	E
Template Known Secondary structure															G	G	G	S		S	S	S	S		S	S	S																															S	S						T												T	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	V	P	L	A	E	V	Q	P	G	M	L	L	R	L	T	T	G	D	R	V	P	V	D	G	E	I	T	Q	G	E	A	W	L	D	E	A	M	L	T	G	E	P	I	P	Q	Q	K	G	E	G	D	S	V	H	A	G	T	V	V	Q	D	G	S	V	L	F	R	A	S	A	V	G	S	H	T	T	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	V	S	L	D	N	V	A	V	G	D	L	L	R	V	R	P	G	E	K	I	P	V	D	G	E	V	Q	E	G	R	S	F	V	D	E	S	M	V	T	G	E	P	I	P	V	A	K	E	A	S	A	K	V	I	G	A	T	I	N	Q	T	G	S	F	V	M	K	A	L	H	V	G	S	D	T	M	L	A
Template Known Secondary structure						T	T	T			T	T							S	S					S						S	S							S	S	S	T	T		S	S						T	T					T	T					S											S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	I	R	M	V	R	Q	A	Q	S	S	K	P	E	I	G	Q	L	A	D	K	I	S	A	V	F	V	P	V	V	V	V	I	A	L	V	S	A	A	I	W	Y	F	F	G	P	A	P	Q	I	V	Y	T	L	V	I	A	T	T	V	L	I	I	A	C	P	C	A	L	G	L	A	T	P	M	S	I	I	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	V	Q	M	V	S	D	A	Q	R	S	R	A	P	I	Q	R	L	A	D	T	V	S	G	W	F	V	P	A	V	I	L	V	A	V	L	S	F	I	V	W	A	L	L	G	P	Q	P	A	L	S	Y	G	L	I	A	A	V	S	V	L	I	I	A	C	P	C	A	L	G	L	A	T	P	M	S	I	M	V
Template Known Secondary structure												S	S																																			S	S	S	S	T	T																S	T
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	G	R	A	A	E	F	G	V	L	V	R	D	A	D	A	L	Q	R	A	S	T	L	D	T	V	V	F	D	K	T	G	T	L	T	E	G	K	P	Q	V	V	A	V	K	T	F	A	D	V	D	E	A	Q	A	L	R	L	A	A	A	L	E	Q	G	S	S	H	P	L	A	R	A	I	L	D	K	A	G
Query Conservation
Alig confidence																																																	.
Template Conservation																																																	.
Template Sequence		G	V	G	K	G	A	Q	S	G	V	L	I	K	N	A	E	A	L	E	R	M	E	K	V	N	T	L	V	V	D	K	T	G	T	L	T	E	G	H	P	K	L	T	R	I	V	T	.	D	D	F	V	E	D	N	A	L	A	L	A	A	A	L	E	H	Q	S	E	H	P	L	A	N	A	I	V	H	A	A	K
Template Known Secondary structure									T	T				S									T	S									B	T	T	T	B		S	S									.	S	S	S															S	S
Template Predicted Secondary structure																																																	.
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.		.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
		574	.	.			.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		D	M	Q	.	.	L	P	Q	V	N	G	F	R	T	L	R	G	L	G	V	S	G	E	A	E	G	H	A	L	L	L	G	N	Q	A	L	L	N	E	Q	Q	V	G	T	K	A	I	E	A	E	I	T	A	Q	A	S	Q	G	A	T	P	V	L	L	A	V	D	G	K	A	V	A	L	L	A	V	R	D	P	L
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		E	K	G	L	S	L	G	S	V	E	A	F	E	A	P	T	G	K	G	V	V	G	Q	V	D	G	H	H	V	A	I	G	N	A	R	L	M	Q	E	H	G	G	D	N	A	P	L	F	E	K	A	D	E	L	R	G	K	G	A	S	V	M	F	M	A	V	D	G	K	T	V	A	L	L	V	V	E	D	P	I
Template Known Secondary structure		T	T								S						T	T	T						S	S	S	S						S																								T	T									T	T												B
Template Predicted Secondary structure
Template SS confidence
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.
		652	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	D	S	V	A	A	L	Q	R	L	H	K	A	G	Y	R	L	V	M	L	T	G	D	N	P	T	T	A	N	A	I	A	K	E	A	G	I	D	E	V	I	A	G	V	L	P	D	G	K	A	E	A	I	K	H	L	Q	S	E	G	R	Q	V	A	M	V	G	D	G	I	N	D	A	P	A	L	A	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	S	S	T	P	E	T	I	L	E	L	Q	Q	S	G	I	E	I	V	M	L	T	G	D	S	K	R	T	A	E	A	V	A	G	T	L	G	I	K	K	V	V	A	E	I	M	P	E	D	K	S	R	I	V	S	E	L	K	D	K	G	L	I	V	A	M	A	G	D	G	V	N	D	A	P	A	L	A	K	A
Template Known Secondary structure			S	S												T								S	S													T							S																	S									S	S	T	T							S
Template Predicted Secondary structure
Template SS confidence
		556	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
		732	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	G	I	A	M	G	G	G	S	D	V	A	I	E	T	A	A	I	T	L	M	R	H	S	L	M	G	V	A	D	A	L	A	I	S	R	A	T	L	H	N	M	K	Q	N	L	L	G	A	F	I	Y	N	S	I	G	I	P	V	A	A	G	I	L	W	P	F	T	G	T	L	L	N	P	V	V	A	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	G	I	A	M	G	T	G	T	D	V	A	I	E	S	A	G	V	T	L	L	H	G	D	L	R	G	I	A	K	A	R	R	L	S	E	S	T	M	S	N	I	R	Q	N	L	F	F	A	F	I	Y	N	V	L	G	V	P	L	A	A	G	V	L	Y	P	L	T	G	L	L	L	S	P	M	I	A	A	A
Template Known Secondary structure		S						S	S	S		S							S					S			S	T	T																																			T	S	S	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		636	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.
		812	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	A	L	S	S	I	T	V	V	S	N	A	N	R	L	L	R	F	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	M	A	L	S	S	V	S	V	I	I	N	A	L	R	L	K	R	V	T
Template Known Secondary structure																T				T	T
Template Predicted Secondary structure
Template SS confidence
		716	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.