Job Description Q59385 Confidence 29.02% Date Thu Jan 5 12:37:17 GMT 2012 Rank 373 Aligned Residues 127 % Identity 14% Template c3k07A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:cation efflux system protein cusa; PDBTitle: crystal structure of cusa Resolution 3.52 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.											.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	K	R	V	K	E	S	L	E	Q	R	P	D	V	E	Q	A	D	V	S	I	T	E	A	H	V	T	G	T	A	S	.	.	.	.	.	.	.	.	.	.	A	E	Q	L	I	E	T	I	K	Q	A	G	Y	D	A	S	V	S	H	P	K	A	K	P	L	A	E	S	S	I	P	S	E	A	L	T	A	V	S
Query Conservation																																	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	Y	P	L	T	T	T	M	L	S	V	P	G	A	K	T	V	R	G	F	S	Q	F	G	D	S	Y	V	Y	V	I	F	E	D	G	T	D	P	Y	W	A	R	S	R	V	L	E	Y	L	N	Q	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	L	P	A	G	V	S
Template Known Secondary structure								T	T	T	T	S	T	T										S	S										S	S			T	T															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S		S	S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.																				.	120	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.				.	.	.	.	110	.	.						.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.									.	.	.	.	150
Predicted Secondary structure																				.	.	.								.	.	.	.	.																											.								.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.								.	.	.	.	.																											.								.	.	.	.	.	.	.	.
Query Sequence		E	A	L	P	A	A	T	A	D	D	D	D	S	Q	Q	L	L	L	.	.	.	S	G	M	S	C	A	S	.	.	.	.	.	C	V	T	R	V	Q	N	A	L	Q	S	V	P	G	V	T	Q	A	R	V	N	L	A	E	R	T	.	A	L	V	M	G	S	A	.	.	.	.	.	.	.	.	S	P	Q	D	L
Query Conservation																				.	.	.								.	.	.	.	.																											.								.	.	.	.	.	.	.	.
Alig confidence																				.	.	.								.	.	.	.	.																											.								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	L	G	P	D	A	T	G	V	G	W	I	Y	E	Y	A	L	V	D	R	S	G	K	H	D	L	A	D	L	R	S	L	Q	D	W	F	L	K	Y	E	L	K	T	I	P	D	V	A	E	V	A	S	V	G	G	V	V	K	E	Y	Q	V	V	I	D	P	Q	R	L	A	Q	Y	G	I	S	L	A	E	V
Template Known Secondary structure							S			G	G	G										T	T	S		S												T						T	T	S	T	T									S																	T	T
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	A	V	E	K	A	G	Y	G	A	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	S	A	L	D	A	S	N	Q	E	A	G	G
Template Known Secondary structure							T	S	S
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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