Job Description Q59385 Confidence 100.00% Date Thu Jan 5 12:37:17 GMT 2012 Rank 8 Aligned Residues 563 % Identity 22% Template c3b8eC_ PDB info PDB header:hydrolase/transport protein Chain: C: PDB Molecule:sodium/potassium-transporting atpase subunit PDBTitle: crystal structure of the sodium-potassium pump Resolution 3.50 Å

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		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	F	Y	R	S	A	W	K	S	L	L	N	G	A	A	T	M	D	T	L	V	A	L	G	T	G	V	A	W	L	Y	S	M	S	V	N	L	W	P	Q	W	F	P	M	E	A	R	H	L	Y	Y	E	A	S	A	M	I	I	G	L	I	N	L	G	H	M	L	E	A	R	A	R	Q	R	S	S	K	A	L	E
Query Conservation
Alig confidence														.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.
Template Sequence		P	E	W	V	K	F	C	R	Q	L	F	G	.	.	.	.	.	.	.	G	F	S	M	L	L	W	I	G	A	I	L	C	F	L	A	Y	G	I	Q	A	A	T	E	E	E	P	Q	N	D	N	L	Y	L	G	V	V	L	S	A	V	V	I	I	T	G	C	F	S	Y	Y	Q	E	A	K	S	S	K	I	M	E
Template Known Secondary structure								T		T	T	T	S	.	.	.	.	.	.	.	T	T											T	T	T	T	T	T	S			S	S			G	G	G	T	T	T																	T	T	T	T	T	S						S
Template Predicted Secondary structure														.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.								.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.		.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.																							.	.	.	.	.	.	.
Query SS confidence																																																				.																							.	.	.	.	.	.	.
Query Sequence		K	L	L	D	L	T	P	P	T	A	R	L	V	T	D	E	G	E	K	S	V	P	L	A	E	V	Q	P	G	M	L	L	R	L	T	T	G	D	R	V	P	V	D	G	E	I	T	Q	G	E	.	A	W	L	D	E	A	M	L	T	G	E	P	I	P	Q	Q	K	G	E	G	D	S	.	.	.	.	.	.	.
Query Conservation																																																				.																							.	.	.	.	.	.	.
Alig confidence																																																				.																							.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	F	K	N	M	V	P	Q	Q	A	L	V	I	R	N	G	E	K	M	S	I	N	A	E	E	V	V	V	G	D	L	V	E	V	K	G	G	D	R	I	P	A	D	L	R	I	I	S	A	N	G	C	K	V	D	N	S	S	L	T	G	E	S	E	P	Q	T	R	S	P	D	F	T	N	E	N	P	L	E	T
Template Known Secondary structure					T	S	S		S						B	S	S	S						G	G	G			T	T							T	T	S	B			S																			S			S						S	S			S	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
					388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	V	H	A	G	T	V	V	Q	D	G	S	V	L	F	R	A	S	A	V	G	S	H	T	T	L	S	R	I	I	R	M	V	R	Q	A	Q	S	S	K	P	E	I	G	Q	L	A	D	K	I	S	A	V	F	V	P	V	V	V	V	I	A	L	V	S	A	A	I	W	Y	F	F	G	P	A	P	Q	I
Query Conservation		.	.	.
Alig confidence		.	.	.																																																																											.	.
Template Conservation																																																																															.	.
Template Sequence		R	N	I	A	F	F	S	T	N	C	V	E	G	T	A	R	G	I	V	V	Y	T	G	D	R	T	V	M	G	R	I	A	T	L	A	S	G	L	E	G	G	Q	T	P	I	A	A	E	I	E	H	F	I	H	I	I	T	G	V	A	V	F	L	G	V	S	F	F	I	L	S	L	I	L	E	Y	T	.	.	W
Template Known Secondary structure		T	T				S	S																G	G	G	S																																												T	T	T	T	T	T	S		.	.	S
Template Predicted Secondary structure																																																																															.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.			310
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	T	L	V	I	A	T	T	V	L	I	I	A	C	P	C	A	L	G	L	A	T	P	M	S	I	I	S	G	V	G	R	A	A	E	F	G	V	L	V	R	D	A	D	A	L	Q	R	A	S	T	L	D	T	V	V	F	D	K	T	G	T	L	T	E	G	K	P	Q	V	V	A	V	K	T	F	A	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	A	V	I	F	L	I	G	I	I	V	A	N	V	P	E	G	L	L	A	T	V	T	V	C	L	T	L	T	A	K	R	M	A	R	K	N	C	L	V	K	N	L	E	A	V	E	T	L	G	S	T	S	T	I	C	S	D	K	T	G	T	L	T	Q	N	R	M	T	V	A	H	M	W	S	D	N	Q	I
Template Known Secondary structure							T						T	T	T	S		T	T	T																G	G	G	S				S	S	G	G	G	G	G	T	T	T	T												T	B		S	S								T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		545																			.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.																		.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.										.	580
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Query Sequence		D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	Q	A	L	R	L	A	A	A	L	E	Q	G	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	P	L	A	R	A	I	L	D	K	A	G	D	M	Q	L	P	.	.	.	.	.	.	.	.	.	Q	V
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	E	A	D	T	T	E	N	Q	S	G	V	S	F	D	K	T	S	A	T	W	L	A	L	S	R	I	A	G	L	C	N	R	A	V	F	Q	A	N	Q	E	N	L	P	I	L	K	R	A	V	A	G	D	A	S	E	S	A	L	L	K	C	I	E	L	C	C	G	S	V	K	E	M	R	E	R	Y	T	K	I
Template Known Secondary structure							S	S	S		S	S			S				S													S							S				S	S		G	G	G	S				S														S	S	S									S
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
		581	.	.	.	.	.	.	.	.	590	.	.	.	.	.										.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.															.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	G	F	R	T	L	R	G	L	G	V	S	G	E	A	.	.	.	.	.	.	.	.	.	E	G	H	A	L	L	L	G	N	Q	A	L	L	N	E	Q	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	K	A	I	E	A	E	I	T	A	Q	A	S	Q	G	A	T	P	V	L	L	A	V
Query Conservation																	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	I	P	F	N	S	T	N	K	Y	Q	L	S	I	H	K	N	P	N	T	A	E	P	R	H	L	L	V	M	K	G	A	P	E	R	I	L	D	R	C	S	S	I	L	I	H	G	K	E	Q	P	L	D	E	E	L	K	D	A	F	Q	N	A	Y	L	E	L	G	G	L	G	E	R	V	L	G	F	C	H
Template Known Secondary structure						S			S	S											S	T	T	S		S														T	T						B	T	T	B			B			S															T	T	T
Template Predicted Secondary structure
Template SS confidence
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
																										638	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	K	A	V	A	L	L	A	V	R	D	P	L	R	S	D	S	V	A	A	L	Q	R	L	H	K	A	G	Y	R	L	V	M	L	T	G	D	N	P	T	T	A	N	A	I	A	K	E	A	G	I	D	E	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.
Template Conservation
Template Sequence		L	F	L	P	D	E	Q	F	P	E	G	F	Q	F	D	T	D	D	V	N	F	P	L	D	N	L	C	F	V	G	L	I	S	M	I	D	P	P	R	A	A	V	P	D	A	V	G	K	C	R	S	A	G	I	K	V	I	M	V	T	G	D	H	P	I	T	A	K	A	I	A	K	G	V	G	I	I	S	E	G
Template Known Secondary structure						G	G	G	S		T	T					T	T	S			S			S	S													B		S	S											T	T								S	S												T	S	S			S
Template Predicted Secondary structure
Template SS confidence
		551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
																																																					692	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	A	G	V	L	P	D	G	K	A	E	A	I	K	H	L	Q	S	E	G	R	Q	V	A	M	V	G	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	E	T	V	E	D	I	A	A	R	L	N	I	P	V	S	Q	V	N	P	R	D	A	K	A	C	V	V	H	G	S	D	L	K	D	M	T	S	E	Q	L	D	D	I	L	K	Y	H	T	E	I	V	F	A	R	T	S	P	Q	Q	K	L	I	I	V	E	G	C	Q	R	Q	G	A	I	V	A	V	T	G	D
Template Known Secondary structure		B					T	T	S	S	S	S	S	S	T	T	T	T	T	T	T	T			S	B									T	T											T	S	S							S															T	T	T
Template Predicted Secondary structure
Template SS confidence
		631	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710
		721	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.		.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		G	I	N	D	A	P	A	L	A	Q	A	D	V	G	I	A	M	G	.	G	G	S	D	V	A	I	E	T	A	A	I	T	L	M	R	H	S	L	M	G	V	A	D	A	L	A	I	S	R	A	T	L	H	N	M	K	Q	N	L	L	G	A	F	I	Y	N	S	I	G	I	P	V	A	A	G	I	L	W	P	F
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		G	V	N	D	S	P	A	S	K	K	A	D	I	G	V	A	M	G	I	A	G	S	D	V	S	K	Q	A	A	D	M	I	L	L	D	D	N	F	A	S	I	V	T	G	V	E	E	G	R	L	I	F	D	N	L	K	K	S	I	A	Y	T	L	T	S	N	I	P	E	I	T	P	F	L	I	F	I	I	A	N
Template Known Secondary structure		S	G	G	G	T	T					S	S						T	T	S	S		T	T						S				S	S			T	T	T	T																							T	S	S	G	G	G	T									T
Template Predicted Secondary structure
Template SS confidence
		711	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790
		800	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	T	L	L	N	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	P	L	P	L	G	T	V
Template Known Secondary structure					S	S
Template Predicted Secondary structure
Template SS confidence
		791	.	.	.	.	.	.	.