 |
Job Description | Q59385 | Confidence | 93.53% | Date | Thu Jan 5 12:37:17 GMT 2012 |
Rank | 169 | Aligned Residues | 81 |
% Identity | 14% | Template | c2pkeA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:haloacid delahogenase-like family hydrolase; |
PDBTitle: crystal structure of haloacid delahogenase-like family hydrolase2 (np_639141.1) from xanthomonas campestris at 1.81 a resolution
|
Resolution | 1.81 Å |
|
 |
  |   |
650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
| . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Query Sequence |   |
P | L | R | S | D | S | V | A | A | L | Q | R | L | H | K | A | G | Y | R | L | V | M | L | T | G | D | N | P | T | T | A | N | A | I | A | K | E | A | G | I | D | E | V | I | A | G | V | . |
. |
. |
. |
. |
. |
L | P | D | G | K | A | E | A | I | K | H | L | Q | S | E | G | R | Q | V | A | M | V | G | D | G | I | . |
Query Conservation |   |
  |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |
|   |
|
|
|
|
|   |   |   |
|
|   |   |
|
|   |   |
|
|
|   |   |
|   |
|   |   | . | . | . | . | . | . |   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |
|   |
|
|
|
|
|
| . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   | . |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|   |
|
|
|   |   |   |
Template Sequence |   |
E | V | I | A | G | V | R | E | A | V | A | A | I | A | A | D | . |
Y | A | V | V | L | I | T | K | G | D | L | F | H | Q | E | Q | K | I | E | Q | S | G | L | S | D | L | F | P | R | I | E | V | V | S | E | K | D | P | Q | T | Y | A | R | V | L | S | E | F | D | L | P | A | E | R | F | V | X | I | G | N | S | L | R |
Template Known Secondary structure |   |
| B |
| T | T |  |  |  |  |  |  |  |  |  | T | T | . | S |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  | S | G | G | G | T |
|
|
|  |  |  |  | S |
|
| S |  |  |  |  |  |  |  |  |  |  |  | T |
|
| G | G | G |  |  |  |  |  | S |
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | |
. | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . |
  |
  |   |
723 | . | . | . | . | . | . | 730 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | D | A | P | A | L | A | Q | A |
Query Conservation |   |
|
|
|
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |   |
|
Template Sequence |   |
S | D | V | E | P | V | L | A | I |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
190 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|