 |
Job Description | Q59385 | Confidence | 50.33% | Date | Thu Jan 5 12:37:17 GMT 2012 |
Rank | 265 | Aligned Residues | 51 |
% Identity | 18% | Template | c2nytB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:probable c->u-editing enzyme apobec-2; |
PDBTitle: the apobec2 crystal structure and functional implications2 for aid
|
Resolution | 2.50 Å |
|
  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | A | S | C | V | T | R | V | Q | N | A | L | Q | S | V | P | G | V | T | Q | A | R | V | N | L | A | E | R | T | A | L | V | M | G | S | A | S | P | Q | D | L | V | Q | A | V | E | K | A | G | Y | G | A | E | A |
Query Conservation |   |
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |
|
|   |   |   |   |
|
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |
|
|   |
|
|   |   |   |   |   |
| . | . | . |   |
|   |
|
|   |
|
|
|
|   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |
|
|   |   |
|   |
|
Template Sequence |   |
C | A | A | C | A | D | R | I | I | K | T | L | S | K | T | K | N | L | . |
. |
. |
R | L | L | I | L | V | G | R | L | F | M | W | E | E | P | E | I | Q | A | A | L | K | K | L | K | E | A | G | C | K | L | R | I |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |  | . | . | . |  |  |  |  |  |  |  |  |
| T | T | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | |
|
|
. | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|