Job Description Q59385 Confidence 59.61% Date Thu Jan 5 12:37:17 GMT 2012 Rank 243 Aligned Residues 154 % Identity 10% Template c2ekcA_ PDB info PDB header:lyase Chain: A: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: structural study of project id aq_1548 from aquifex aeolicus vf5 Resolution 2.00 Å

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		609	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.			.	630	.	.	.	.	.	.	.																		.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	E	Q	Q	V	G	T	K	A	I	E	A	E	I	T	A	Q	A	S	Q	.	.	G	A	T	P	V	L	L	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	K	A	V	A	L	L	A	V	R	D	P	L	R	S	D	S	V	A	A	L	Q	R	L	H	K	A	G	Y	R	L
Query Conservation																						.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																																											.
Template Sequence		L	K	N	G	I	R	F	E	D	V	L	E	L	S	E	T	L	R	K	E	F	P	D	I	P	F	L	L	M	T	Y	Y	N	P	I	F	R	I	G	L	E	K	F	C	R	L	S	R	E	K	G	I	D	G	F	I	V	.	P	D	L	P	P	E	E	A	E	E	L	K	A	V	M	K	K	Y	V	L	S	F
Template Known Secondary structure				T	T																		T	T	S																										T	T							.	T	T																T	T
Template Predicted Secondary structure																																																											.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		670	.	.			.	.	.	.	.	.	.	680	.	.	.	.	.	.	.		.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.
Predicted Secondary structure					.	.																.
Query SS confidence					.	.																.
Query Sequence		V	M	L	.	.	T	G	D	N	P	T	T	A	N	A	I	A	K	E	A	.	G	I	D	E	V	I	A	G	V	L	P	D	G	K	A	E	A	I	K	H	L	Q	S	E	G	R	Q	V	A	M	V	G	D	G	I	N	D	A	P	A	L	A	Q	A	D	V	G	I	A	M	G	G	G	S	D	V	A	I	E
Query Conservation					.	.																.
Alig confidence					.	.																.																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	P	L	G	A	P	T	S	T	R	K	R	I	K	L	I	C	E	A	A	D	E	M	T	Y	F	V	S	V	T	G	Y	E	R	I	K	K	K	V	E	E	Y	R	E	L	C	D	K	P	V	V	V	G	F	G	V	S	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	A	R	E	I	G	S
Template Known Secondary structure							T	T														S	S						S	S																			S						S	S			S		.	.	.	.	.	.	.	.	.	.	.	.	.								T
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.														210	.	.	.	.	.	.	.
		747	.	.	750	.	.	.	.	.	.	.							.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.
Query Sequence		T	A	A	I	T	L	M	R	H	S	L	.	.	.	.	.	.	M	G	V	A	D	A	L	A	I	S	R	A	T	L	H	N	M	K	Q
Query Conservation													.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	D	G	V	V	V	G	S	A	L	V	K	L	A	G	Q	K	K	I	E	D	L	G	N	L	V	K	E	L	K	E	G	L	R	E
Template Known Secondary structure		T	S	S														T	T															T	T	B
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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