Job Description Q59385 Confidence 83.70% Date Thu Jan 5 12:37:17 GMT 2012 Rank 196 Aligned Residues 133 % Identity 12% Template c1oy8A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:acriflavine resistance protein b; PDBTitle: structural basis of multiple drug binding capacity of the acrb2 multidrug efflux pump Resolution 3.63 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.							.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																				.													.	.	.	.	.	.
Query SS confidence																				.													.	.	.	.	.	.
Query Sequence		V	K	R	V	K	E	S	L	E	Q	R	P	D	V	E	Q	A	D	.	V	S	I	T	E	A	H	V	T	G	T	A	.	.	.	.	.	.	S	A	E	Q	L	I	E	T	I	K	Q	A	G	Y	D	A	S	V	S	H	P	K	A	K	P	L	A	E	S	S	I	P	S	E	A	L	T	A	V	S	E	A	L
Query Conservation																				.													.	.	.	.	.	.
Alig confidence																				.													.	.	.	.	.	.
Template Conservation
Template Sequence		T	Q	V	I	E	Q	N	M	N	G	I	D	N	L	M	Y	M	S	S	N	S	D	S	T	G	T	V	Q	I	T	L	T	F	E	S	G	T	D	A	D	I	A	Q	V	Q	V	Q	N	K	L	Q	L	A	M	P	L	L	P	Q	E	V	Q	Q	Q	G	V	S	V	E	K	S	S	S	S	F	L	M	V	V	G
Template Known Secondary structure								T					S	S										T	T	S										T	T															T	T	T	G	G	G	S						T	S
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.									.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.
Query Sequence		P	A	A	T	A	D	D	D	D	S	Q	Q	L	L	L	S	G	M	S	C	A	S	C	V	T	R	V	Q	N	A	L	Q	S	V	P	G	V	T	Q	A	R	V	N	L	A	E	R	T	A	L	V	M	G	S	A	.	.	.	.	.	.	.	.	S	P	Q	D	L	V	Q	A	V	E	K
Query Conservation																																																									.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.																																				.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.
Template Sequence		V	I	N	T	D	G	T	M	T	Q	E	D	I	S	.	.	.	.	.	.	D	Y	V	A	A	N	M	K	D	A	I	S	R	T	S	G	V	G	D	V	Q	L	F	G	S	Q	Y	A	M	R	I	W	M	N	P	N	E	L	N	K	F	Q	L	T	P	V	D	V	I	T	A	I	K	A
Template Known Secondary structure					S	S	S				T	T				.	.	.	.	.	.					T	T	T					T	T	T	T	T							S	S																T	T	T
Template Predicted Secondary structure																.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.							.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions