Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6S3
Confidence24.70%DateThu Jan 5 11:03:47 GMT 2012
Rank5Aligned Residues80
% Identity33%Templated1h80a_
SCOP infoSingle-stranded right-handed beta-helix Pectin lyase-like iota-carrageenase
Resolution1.6

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40... ......50.........60.........70.........80 .........90.........100..
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Query Sequence  NSLIGYGLVV. . . . . . . . . . GLDGTGDQTTQTPFTTQTLNNMLSQLGITVPTGTNMQ. LKNVAAVMVTASLPPFGRQGQT
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Template Sequence  NALFGYGLIQTYGADNILFRNLHSEGGIALRME. TDNLLMKNYKQGGIRNIFADNIRCSKGLAAVMFG. . . PHFMKNGDV
Template Known Secondary structure  S

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   213......220.........230.........240..... ....250.........260.........270......... 280........
 
   103......110.......
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Query Sequence  IDVVVSSMGNAKSLR
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Template Sequence  QVTNVSSVSCGSAVR
Template Known Secondary structure  SSS
S
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   289290.........300...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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