 |
Job Description | P0A6S3 | Confidence | 9.63% | Date | Thu Jan 5 11:03:47 GMT 2012 |
Rank | 57 | Aligned Residues | 28 |
% Identity | 39% | Template | c2v3cC_ |
PDB info |
PDB header:signaling protein | Chain: C: PDB Molecule:signal recognition 54 kda protein; |
PDBTitle: crystal structure of the srp54-srp19-7s.s srp rna complex2 of m. jannaschii
|
Resolution | 2.50 Å |
|
  |   |
41 | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | V | V | G | L | D | G | T | G | D | Q | T | T | Q | T | P | F | T | T | Q | T | L | N | N | M | L | S | Q | L | G | I | T | V |
Query Conservation |   |
|
|
|
|
|   |
|
|
|
|   |   |   |   |   |   |
|
|   |
|
|
|   |
|
|
|   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |
|   |
| . |
|
|
| . | . | . | . |
|   |
|
|
|
|   |   |   |   |   |   |
|   |
|
|
Template Sequence |   |
L | L | V | G | I | Q | G | S | G | . |
K | T | T | . |
. |
. |
. |
T | A | A | K | L | A | R | Y | I | Q | K | R | G | L | K | P |
Template Known Secondary structure |   |
 |  |  |
|
| S | S | S | S | . | T | T |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
| . |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
104 | . | . | . | . | . | 110 | . | . | |
. | . | . | |
|
|
|
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|