Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6S3
Confidence8.77%DateThu Jan 5 11:03:47 GMT 2012
Rank73Aligned Residues31
% Identity16%Templatec2jppB_
PDB info PDB header:translation/rnaChain: B: PDB Molecule:translational repressor; PDBTitle: structural basis of rsma/csra rna recognition: structure of2 rsme bound to the shine-dalgarno sequence of hcna mrna
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   261........270.........280.........290.
Predicted Secondary structure 









Query SS confidence 






























Query Sequence  SVVMNREVTLDSCAVAQGNLSVTVNRQANVS
Query Conservation 


 
  
 

 









 
     

Alig confidence 






























Template Conservation   
 




 
 
  
    




 

  
 
Template Sequence  SINIGDDITITILGVSGQQVRIGINAPKDVA
Template Known Secondary structure  TTTTT

TTS
Template Predicted Secondary structure 









Template SS confidence 






























   11........20.........30.........40.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions