Job Description Q46920 Confidence 5.81% Date Thu Jan 5 12:35:53 GMT 2012 Rank 71 Aligned Residues 49 % Identity 16% Template c3vcbB_ PDB info PDB header:viral protein Chain: B: PDB Molecule:rna-directed rna polymerase; PDBTitle: c425s mutant of the c-terminal cytoplasmic domain of non-structural2 protein 4 from mouse hepatitis virus a59 Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.									.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.																					.
Query SS confidence																			.	.	.	.	.	.	.	.																					.
Query Sequence		N	L	I	E	S	K	S	F	K	L	Y	L	N	S	F	N	Q	.	.	.	.	.	.	.	.	T	R	F	N	N	W	D	E	V	R	Q	T	L	E	R	D	L	S	T	C	.	A	Q	G	K	I	S	V	A	L	Y	R	L
Query Conservation																			.	.	.	.	.	.	.	.																					.
Alig confidence																			.	.	.	.	.	.	.	.																					.
Template Conservation
Template Sequence		N	S	V	S	D	V	A	F	N	R	Y	L	S	L	Y	N	K	Y	R	Y	F	S	G	K	M	D	T	A	A	Y	R	E	A	A	C	S	Q	L	A	K	A	M	E	T	F	N	H	N	N	G	N	D	V	L	Y	Q	P	P
Template Known Secondary structure		T	T	S																T	T			S																								T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions