Job Description Q46920 Confidence 28.68% Date Thu Jan 5 12:35:53 GMT 2012 Rank 18 Aligned Residues 49 % Identity 18% Template c3gzfD_ PDB info PDB header:viral protein Chain: D: PDB Molecule:replicase polyprotein 1ab; PDBTitle: structure of the c-terminal domain of nsp4 from feline coronavirus Resolution 2.76 Å

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		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.									.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.
Query Sequence		N	L	I	E	S	K	S	F	K	L	Y	L	N	S	F	N	Q	.	.	.	.	.	.	.	.	T	R	F	N	N	W	D	E	V	R	Q	T	L	E	R	D	L	S	T	C	A	Q	G	K	I	S	V	A	L	Y	R	L
Query Conservation																			.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	S	T	S	L	D	R	I	K	S	Y	A	N	S	F	N	K	Y	K	Y	Y	T	G	S	M	G	E	A	D	Y	R	M	A	C	Y	A	H	L	G	K	A	L	M	D	Y	S	V	S	R	N	D	K	L	Y	T	P	P
Template Known Secondary structure		T	T	T	T										T					S	S			S				T	T																				S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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