 |
Job Description | Q46920 | Confidence | 4.91% | Date | Thu Jan 5 12:35:53 GMT 2012 |
Rank | 81 | Aligned Residues | 23 |
% Identity | 48% | Template | c2k48A_ |
PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:nucleoprotein; |
PDBTitle: nmr structure of the n-terminal coiled coil domain of the2 andes hantavirus nucleocapsid protein
|
Resolution | UNK |
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
. | . | . | . | 50 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | V | P | R | S | L | N | R | D | P | L | G | L | K | . |
A | D | N | L | P | F | H | G | T | D | I | W | T |
Query Conservation |   |
|
|
|
|   |   |   |
|   |   |
|   |   |   | . |   |   |   |   |   |
|   |
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
| . | . | . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
P | I | P | N | P | L | . |
. |
. |
. |
L | G | L | D | S | T | E | N | L | Y | F | Q | G | I | D | P | F | T |
Template Known Secondary structure |   |
|
|
|
| S |
| . | . | . | . |
| S |
|
|
|
|
|
|
|
|
|
|
|
|
| S |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | |
|
|
|
. | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|