Job Description Q46920 Confidence 77.93% Date Thu Jan 5 12:35:53 GMT 2012 Rank 7 Aligned Residues 164 % Identity 16% Template c1rg9D_ PDB info PDB header:transferase Chain: D: PDB Molecule:s-adenosylmethionine synthetase; PDBTitle: s-adenosylmethionine synthetase complexed with sam and ppnp Resolution 2.50 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.							.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.
Query Sequence		E	L	S	W	L	N	A	K	G	L	P	Q	V	A	V	G	H	V	E	L	D	Y	T	S	V	N	L	I	E	S	K	S	F	K	L	Y	L	N	S	F	N	Q	T	R	F	N	N	W	D	E	V	R	Q	T	L	E	R	D	L	S	T	C	A	.	.	.	.	.	.	Q	G	K	I	S	V	A	L	Y	R	L
Query Conservation																																																																	.	.	.	.	.	.
Alig confidence															.	.	.	.	.																.	.	.																												.	.	.	.	.	.
Template Conservation															.	.	.	.	.																.	.	.
Template Sequence		T	L	P	W	L	R	P	D	A	K	S	Q	V	.	.	.	.	.	T	F	Q	Y	D	D	G	K	I	V	G	I	D	A	V	.	.	.	V	L	S	T	Q	H	S	E	E	I	D	Q	K	S	L	Q	E	A	V	M	E	E	I	I	K	P	I	L	P	A	E	W	L	T	S	A	T	K	F	F	I	N	P	T
Template Known Secondary structure		S	S	T	T										.	.	.	.	.						T	T									.	.	.								T	T	S													T	T	T	T	T	S		T	T	T			T	T						S	T	T
Template Predicted Secondary structure															.	.	.	.	.																.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.						.	170	.	.	.	.	.	.	.	.	.	180	.	.	.				.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.						180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.																															.	.	.	.	.
Query SS confidence																	.																															.	.	.	.	.
Query Sequence		D	E	L	E	G	Q	P	I	G	H	F	N	G	T	C	.	I	D	D	Q	D	I	T	I	D	N	Y	E	F	T	T	D	Y	L	E	N	A	T	C	G	E	K	V	V	E	E	.	.	.	.	.	T	L	V	S	H	L	L	K	S	N	C	L	I	T	H	Q	P	D	W	G	S	L	Q	I	Q	Y	R	G	R
Query Conservation																	.																															.	.	.	.	.
Alig confidence						.	.	.									.																															.	.	.	.	.												.
Template Conservation						.	.	.																																																								.
Template Sequence		G	R	F	V	.	.	.	I	G	G	P	M	G	D	C	G	L	T	G	R	K	I	I	V	D	T	Y	G	G	M	A	R	H	G	G	G	A	F	S	G	K	D	P	S	K	V	D	R	S	A	A	Y	A	A	R	Y	V	A	K	N	I	V	.	A	A	G	L	A	D	R	C	E	I	Q	V	S	Y	A	I	G
Template Known Secondary structure		S				.	.	.	S						S				T	T							T	T	T	T	S	S				S				T	T	B		T	T	S																		.		T	T	S	B	S										T	T
Template Predicted Secondary structure						.	.	.																																																								.
Template SS confidence
		228	.	230	.				.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	D	R	E	K	L	L	R	Y	L	V	S	F	R	H	H	N	E	F	H	E	Q	C	V	E	R	I	F	N
Query Conservation
Alig confidence									.	.
Template Conservation									.	.
Template Sequence		V	A	E	P	T	S	I	.	.	M	V	E	T	F	G	T	E	K	V	P	S	E	Q	L	T	L	L	V	R	E
Template Known Secondary structure				S		S			.	.					T	T		B	S	S
Template Predicted Secondary structure									.	.
Template SS confidence
		304	.	.	.	.	.	310			.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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