Job Description P76343 Confidence 3.76% Date Thu Jan 5 12:22:04 GMT 2012 Rank 24 Aligned Residues 55 % Identity 5% Template c2wlvA_ PDB info PDB header:virus protein Chain: A: PDB Molecule:gag polyprotein; PDBTitle: structure of the n-terminal capsid domain of hiv-2 Resolution 1.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	A	K	Q	V	T	W	L	K	V	C	L	H	L	A	G	L	L	P	F	L	W	L	V	W	A	I	N	H	G	G	L	G	A	D	P	V	K	D	I	Q	H	F	T	G	R	T	A	L	K	F	L	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	P	R	T	L	N	A	W	V	K	L	V	E	E	K	K	F	G	A	E	V	V	P	G	F	Q	A	L	S	E	G	C	T	P	Y	D	I	N	Q	M	L	N	C	V	G	D	H	Q	A	A	M	Q	I	I
Template Known Secondary structure																		T	S		T	T									T	T	T												T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions