Job Description P21367 Confidence 23.03% Date Thu Jan 5 11:38:12 GMT 2012 Rank 198 Aligned Residues 68 % Identity 21% Template c3thxB_ PDB info PDB header:dna binding protein/dna Chain: B: PDB Molecule:dna mismatch repair protein msh3; PDBTitle: human mutsbeta complexed with an idl of 3 bases (loop3) and adp Resolution 2.70 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.						.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.
Query SS confidence																																								.	.	.	.	.
Query Sequence		V	P	E	L	K	A	Q	F	P	D	T	P	Y	I	A	R	P	G	N	I	N	A	W	D	N	E	D	F	V	K	A	V	K	A	T	G	K	K	.	.	.	.	.	Q	L	I	I	A	G	V	V	T	E	V	C	V	A	F	P	A	L	S	A	I	E	E	G	F	D	V	F	V	V	T
Query Conservation																																								.	.	.	.	.
Alig confidence																																								.	.	.	.	.											.
Template Conservation																																																							.
Template Sequence		Y	I	E	M	K	Q	Q	H	K	D	A	V	L	C	V	E	C	G	Y	K	Y	R	F	F	G	E	D	A	E	I	A	A	R	E	L	N	I	Y	C	H	L	D	H	N	F	M	T	A	S	I	P	T	H	.	R	L	F	V	H	V	R	R	L	V	A	K	G	Y	K	V	G	V	V	K
Template Known Secondary structure							T	T	T	T	T	S							S	S																	T							T	T								G	G	.	G												T
Template Predicted Secondary structure																																																							.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions