Return to main results Retrieve Phyre Job Id

Job DescriptionP21367
Confidence100.00%DateThu Jan 5 11:38:12 GMT 2012
Rank16Aligned Residues154
% Identity16%Templatec3eefA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:n-carbamoylsarcosine amidase related protein; PDBTitle: crystal structure of n-carbamoylsarcosine amidase from thermoplasma2 acidophilum
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20....... ..30.........40.........50.........60. ........70....
Predicted Secondary structure 





.










................







Query SS confidence 















.

































. . . . . . . . . . . . . . . .












Query Sequence  DAAVLLVDHQAGLLSL. VRDIEPDKFKNNVLALGDLAKYFNLPTILTTSFE. . . . . . . . . . . . . . . . TGPNGPLVPELKA
Query Conservation   






 
  
   .        
   
  
   

   



 
    ................    
    

  
Alig confidence 















.

































................












Template Conservation 







 
  
                
  
   

     

                      
         
  
Template Sequence  KPALVVVDXVNEFIHGRLATPEAXKTVGPARKVIETFRRSGLPVVYVNDSHYPDDPEIRIWGRHSXKGDDGSEVIDEIRP
Template Known Secondary structure 


BTSTT

TT


B
TTSTT
S
SBTTSGGGSB
GGG

Template Predicted Secondary structure 











































Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   75....80.........90.........100.........110.........120.........130.........140.........150....
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  QFPDTPYIARPGNINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDR
Query Conservation    
    
  
   


    
   
   

  


 

 
  

  

 

   

 
 

 

 

     
  

 
Alig confidence 
..












































































Template Conservation   ..     
 
   


  
 
   
   

  


 
  
  

  

  
   
  
 

 

 

     
   
  
Template Sequence  S. . AGDYVLEKHAYSGFYGTNLDXILRANGIDTVVLIGLDADICVRHTAADALYRNYRIIVVEDAVAARIDPNWKDYFTR
Template Known Secondary structure 
..TT
SSSSTTTTSSTT


TTTTT

SS
TT
Template Predicted Secondary structure 
..































Template SS confidence 















































































   82 .......90.........100.........110.........120.........130.........140.........150.........
 
   155....160.........
Predicted Secondary structure 



Query SS confidence 














Query Sequence  LSQAGAQLMTWFGVA
Query Conservation 
   
  
 
 
  
Alig confidence 
..











Template Conservation   ..  
 
    

 
Template Sequence  V. . YGATVKRSDEIE
Template Known Secondary structure  ..


TT


Template Predicted Secondary structure  ..


Template SS confidence 














   160 .........170..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions