|   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 70 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|  |  |  |  |
|
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | A | A | V | L | L | V | D | H | Q | A | G | L | L | S | L | . |
V | R | D | I | E | P | D | K | F | K | N | N | V | L | A | L | G | D | L | A | K | Y | F | N | L | P | T | I | L | T | T | S | F | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | G | P | N | G | P | L | V | P | E | L | K | A |
Query Conservation |   |
  |
|
|
|
|
|
|
|   |
|   |   |
|   |   |   | . |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |
|
|
|
|   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
K | P | A | L | V | V | V | D | X | V | N | E | F | I | H | G | R | L | A | T | P | E | A | X | K | T | V | G | P | A | R | K | V | I | E | T | F | R | R | S | G | L | P | V | V | Y | V | N | D | S | H | Y | P | D | D | P | E | I | R | I | W | G | R | H | S | X | K | G | D | D | G | S | E | V | I | D | E | I | R | P |
Template Known Secondary structure |   |
|  |  |  |  |  |  |
|
| B |  |  |  |  | T | S | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |
| B |
| T | T | S | T | T |  |  |  |  |
| S |
| S | B | T | T | S | G | G | G | S | B |
| G | G | G |
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | F | P | D | T | P | Y | I | A | R | P | G | N | I | N | A | W | D | N | E | D | F | V | K | A | V | K | A | T | G | K | K | Q | L | I | I | A | G | V | V | T | E | V | C | V | A | F | P | A | L | S | A | I | E | E | G | F | D | V | F | V | V | T | D | A | S | G | T | F | N | E | I | T | R | H | S | A | W | D | R |
Query Conservation |   |
  |   |
|   |   |   |   |
|   |   |
|   |   |   |
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|
|
|   |
|
|   |
|   |   |
|
|   |   |
|
|   |
|
|   |   |   |
|
|   |
|   |
|
|   |
|
|   |
|
|   |   |   |   |   |
|   |   |
|
|   |
|
Alig confidence |   |
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  | . | . |   |   |   |   |   |
|   |
|   |   |   |
|
|
|   |   |
|   |
|   |   |   |
|   |   |   |
|
|   |   |
|
|
|   |
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |
|
|   |
|
|   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
S | . |
. |
A | G | D | Y | V | L | E | K | H | A | Y | S | G | F | Y | G | T | N | L | D | X | I | L | R | A | N | G | I | D | T | V | V | L | I | G | L | D | A | D | I | C | V | R | H | T | A | A | D | A | L | Y | R | N | Y | R | I | I | V | V | E | D | A | V | A | A | R | I | D | P | N | W | K | D | Y | F | T | R |
Template Known Secondary structure |   |
| . | . | T | T |
|  |  |  |  |  | S | S | S | S | T | T | T | T | S | S |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |
| T | T | T |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |
| S | S |
| T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
| . | . |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | |
|
. | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
  |
  |   |
155 | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | S | Q | A | G | A | Q | L | M | T | W | F | G | V | A |
Query Conservation |   |
|   |   |   |
|   |   |
|   |
|   |
|   |   |
|
Alig confidence |   |
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  | . | . |   |   |
|   |
|   |   |   |   |
|
|   |
Template Sequence |   |
V | . |
. |
Y | G | A | T | V | K | R | S | D | E | I | E |
Template Known Secondary structure |   |
 | . | . |  |
|
|  |  |  |
| T | T |
|
|
|
Template Predicted Secondary structure |   |
 | . | . |  |
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
160 | |
|
. | . | . | . | . | . | . | . | . | 170 | . | . |
  |