Job Description P21367 Confidence 99.97% Date Thu Jan 5 11:38:12 GMT 2012 Rank 25 Aligned Residues 152 % Identity 22% Template c2h0rD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:nicotinamidase; PDBTitle: structure of the yeast nicotinamidase pnc1p Resolution 2.90 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure															.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	L	L	V	D	H	Q	A	G	L	L	S	.	.	.	L	V	R	D	I	E	P	D	K	F	K	N	N	V	L	A	L	G	D	L	A	K	Y	F	N	L	P	T	I	L	T	T	S	F	E	T	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation															.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	I	V	V	D	M	Q	N	D	F	I	S	P	L	G	S	L	T	V	P	K	G	E	E	L	I	N	P	I	S	D	L	M	Q	D	A	D	R	D	W	H	R	I	V	V	T	R	D	W	H	P	S	R	H	I	S	F	A	K	N	H	K	D	K	E	P	Y	S	T	Y	T	Y	H	S	P	R	P	G	D
Template Known Secondary structure									B					S	T	T	S	T	T			T	T	G	G	G	G											G	G	G												B		T	T		T	T	B	G	G	G	S	T	T			T	T									S	S	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
																				65	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.													.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	P	L	V	P	E	L	K	A	Q	F	P	.	D	T	P	Y	I	A	R	P	.	.	.	.	.	.	.	.	.	.	.	.	G	N	I	N	A	W	D	N	E	D	F	V	K	A	V	K	A	T	G	K	K	Q	L	I	I	A	G	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	S	T	Q	E	G	I	L	W	P	V	H	C	V	K	N	T	W	G	S	Q	L	V	D	Q	I	M	D	Q	V	V	T	K	H	I	K	I	V	D	K	G	F	L	T	D	R	E	Y	Y	S	A	F	H	D	I	W	N	F	H	K	T	D	M	N	K	Y	L	E	K	H	H	T	D	E	V	Y	I	V	G	V
Template Known Secondary structure										B		S			B	T	T	S	G	G	G	S	B												T									S	T	T					S	S	S	B		T	T	S		S	B		S								T	T		S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		V	T	E	V	C	V	A	F	P	A	L	S	A	I	E	E	G	F	D	V	F	V	V	T	D	A	S	G	T	F	N	E	.	.	I	T	R	H	S	A	W	D	R	L	S	Q	A	G	A	Q	L	M	T	W
Query Conservation																																		.	.
Alig confidence																																		.	.
Template Conservation
Template Sequence		A	L	E	Y	C	V	K	A	T	A	I	S	A	A	E	L	G	Y	K	T	T	V	L	L	D	Y	T	R	P	I	S	D	D	P	E	V	I	N	K	V	K	E	E	L	K	A	H	N	I	N	V	V	D	K
Template Known Secondary structure			T	T	T												T	T													S	S			T												T	T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions