|   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | A | L | S | T | L | F | T | D | A | R | T | H | N | G | W | R | E | T | P | V | S | D | E | T | L | R | E | I | Y | A | L | M | K | W | G | P | T | S | A | N | C | S | P | A | R | I | V | F | T | R | T | A | E | G | K | E | R | L | R | P | A | L | S | S | G | N | L | Q | K | T | L | T | A | P | V | T | A | I | V |
Query Conservation |   |
  |   |
|   |   |
|
|   |   |
|
|
|
|
|   |
|   |   |   |   |
|   |   |
|   |
|   |   |
|
|   |   |
|   |   |
|
|
|   |   |
|   |
|
|   |   |   |   |
|
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|   |   |
|
|
|
|
|   |
|   |   |   |   |
|   |   |
|   |
|   |   |
|
|   |
|
|   |   |
|
|
|   |   |
|   |
|   |   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |
|   |   |
|   |   |
|   |   |   |   |
|   |
Template Sequence |   |
N | N | T | I | E | T | I | L | A | H | R | S | I | R | K | F | T | A | V | P | I | T | D | E | Q | R | Q | T | I | I | Q | A | G | L | A | A | S | S | S | S | M | L | Q | V | V | S | I | V | R | V | T | D | S | E | K | R | N | E | L | A | Q | F | . |
. |
A | G | N | Q | A | Y | V | E | S | A | A | E | F | L | V | F |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  | T |
|
|
|
|
|
| B |
| S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
| G | G | G |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | T | T | S |
| T |  |  |  |  | S | S |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
|
. | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | |
|
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
| . | . |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | W | D | S | E | F | Y | E | R | L | P | L | L | F | P | H | G | D | A | R | S | W | F | T | S | S | P | Q | L | A | E | E | T | A | F | R | N | S | S | M | Q | A | A | Y | L | I | V | A | C | R | A | L | G | L | D | T | G | P | M | S | G | F | . |
. |
D | R | Q | H | V | D | D | A | F | F | T | G | S | T | L | K |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |   |   |
|
|
|
|   |   |   |   |   |   | . | . |   |   |   |   |
|   |
|   |
|   |
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |
|
|
|
|
|   |
|
|   |   |
|
|
|   |
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|
|   |   |   |   |
Template Sequence |   |
C | I | D | Y | Q | R | H | A | T | I | N | P | D | V | Q | A | D | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
T | E | L | T | L | I | G | A | V | D | S | G | I | M | A | Q | N | C | L | L | A | A | E | S | M | G | L | G | G | V | Y | I | G | G | L | R | N | S | A | A | Q | V | D | E | L | L | G | L | P | E | N | S | A |
Template Known Secondary structure |   |
 |  |  |
|  |  |  |  |  |  |
| T | T |
|
|
|
| S | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | G | G | G | G | G | G |  |  |  |  |  |  |  | T | T |
|
| T | T |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
  |
  |   |
166 | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | N | L | L | I | N | I | G | Y | G | D | S | S | K | L | Y | A | R | L | P | R | L | S | F | E | E | A | C | G |
Query Conservation |   |
  |   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |
|
|
|
|   |   |   |   |   |   | . | . |
|
|
|
|
|   |   |   |
|   |   |
Template Sequence |   |
V | L | F | G | M | C | L | G | H | P | D | Q | N | P | E | V | . |
. |
K | P | R | L | P | A | H | V | V | V | H |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
| B | S |
|
|
|
|
| . | . |
|
|
|
|
|  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | |
|
. | . | . | 170 | . | . | . | . | . | . | . |
  |