Job Description P75894 Confidence 100.00% Date Thu Jan 5 12:15:45 GMT 2012 Rank 40 Aligned Residues 161 % Identity 14% Template c3hoiA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:fmn-dependent nitroreductase bf3017; PDBTitle: crystal structure of fmn-dependent nitroreductase bf3017 from2 bacteroides fragilis nctc 9343 (yp_212631.1) from bacteroides3 fragilis nctc 9343 at 1.55 a resolution Resolution 1.55 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.											.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.																											.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.																											.	.	.
Query Sequence		M	N	E	A	V	S	P	G	A	L	S	T	L	F	T	D	A	R	T	H	N	G	W	R	E	T	P	V	S	D	E	T	L	R	E	I	Y	A	L	M	K	.	.	.	.	.	.	.	.	.	.	W	G	P	T	S	A	N	C	S	P	A	R	I	V	F	T	R	T	A	E	G	K	E	R	L	R	.	.	.
Query Conservation																																											.	.	.	.	.	.	.	.	.	.																											.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation
Template Sequence		K	P	D	X	N	R	A	G	L	L	X	K	A	L	S	E	R	H	S	T	R	E	Y	A	S	K	A	L	S	N	T	D	L	S	D	L	L	W	A	A	N	G	I	N	R	S	S	E	G	K	R	T	A	P	S	A	X	N	R	Q	D	I	D	I	Y	V	V	L	P	Q	G	T	Y	L	Y	D	A	K	G	H
Template Known Secondary structure					T	T		S																		S	S																				T	T	T	T			S	S			G	G	G											T	T							T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
												68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	P	A	L	S	S	G	N	L	Q	K	T	L	T	A	P	V	T	A	I	V	A	W	D	S	E	F	Y	E	R	L	P	L	L	F	P	H	G	D	A	R	S	W	F	T	S	S	P	Q	L	A	E	E	T	A	F	R	N	S	S	M	Q	A	A	Y	L	I	V	A	C	R
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	N	L	I	S	E	G	D	H	R	S	A	V	A	G	G	Q	A	F	V	N	N	A	P	V	S	L	V	L	V	S	D	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	G	D	A	K	S	N	H	V	Q	L	X	G	A	X	D	A	G	I	V	S	Q	N	I	S	L	F	C	S
Template Known Secondary structure									S								T	T		G	G	G	G	G	S	S									G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	S		T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.																.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	G	L	D	T	G	P	M	S	G	F	D	R	Q	H	V	D	D	A	F	F	T	G	S	T	L	K	S	N	L	L	I	N	I	G	Y	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	R	L	A	T	V	P	R	A	S	X	D	L	V	R	L	K	A	A	L	K	L	K	D	T	Q	X	P	X	X	N	H	P	V	G	Y	F	K
Template Known Secondary structure				T						B													T			T	T
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions