Job Description P75894 Confidence 100.00% Date Thu Jan 5 12:15:45 GMT 2012 Rank 10 Aligned Residues 187 % Identity 13% Template c3gagB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative nadh dehydrogenase, nadph nitroreductase; PDBTitle: crystal structure of a nitroreductase-like protein (smu.346) from2 streptococcus mutans at 1.70 a resolution Resolution 1.70 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		S	P	G	A	L	S	T	L	F	T	D	A	R	T	H	N	G	W	R	.	E	T	P	V	S	D	E	T	L	R	E	I	Y	A	L	M	K	W	G	P	T	S	A	N	C	S	P	A	R	I	V	F	T	R	T	A	E	G	K	E	R	L	R	P	A	L	S	S	G	N	L	Q	K	T	L	T	A	P	V	T
Query Conservation																					.
Alig confidence																					.																																															.	.
Template Conservation																																																																				.	.
Template Sequence		X	X	N	D	Y	L	N	F	L	D	G	R	V	S	V	R	R	F	D	P	D	A	V	L	P	N	D	L	I	K	D	X	L	E	H	A	S	Y	A	P	S	G	N	N	F	Q	P	W	R	V	V	V	V	K	N	K	N	K	Q	E	D	L	K	K	L	A	.	.	A	L	Q	P	Q	V	A	T	A	S	A	V
Template Known Secondary structure												T			B				B		T	T																T	T	S			G	G	G																					T	T	.	.	T	T		T					S	S
Template Predicted Secondary structure																																																																				.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.																	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	V	A	W	D	S	E	F	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	P	L	L	F	P	H	G	D	A	R	S	W	F	T	S	S	P	Q	L	A	E	E	T	A	F	R	N	S	S	M	Q	A	A	Y	L	I	V	A	C	R	A	L	G	L	D	T	G	P	M	S	G
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	L	L	F	G	D	E	N	A	Y	D	L	T	W	W	Q	E	F	H	V	Q	K	G	I	I	T	K	D	E	A	A	A	R	A	E	R	I	R	Q	Y	F	D	L	H	P	E	D	K	E	T	Q	G	L	R	L	D	V	G	L	F	A	X	N	L	X	Q	V	V	R	V	Y	G	Y	D	S	V	P	X	R	G
Template Known Secondary structure								G	G	G													T	T	S	S																				G	G	G	G	S																						T	T						B
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	R	Q	H	V	D	D	A	F	F	T	G	S	T	L	K	S	N	L	L	I	N	I	G	Y	G	D	S	S	K	L	Y	A	R	L	P	R	L	S	F	E	E	A	C	G	L	L
Query Conservation
Alig confidence																																			.	.
Template Conservation																																			.	.
Template Sequence		V	D	F	D	A	I	K	T	Y	L	D	X	P	N	G	W	E	P	I	L	X	L	P	V	G	K	A	L	Q	A	G	N	P	.	.	H	V	R	K	S	V	A	E	F	A	E	I	I
Template Known Secondary structure		S										T			T	T												B	S	S					.	.
Template Predicted Secondary structure																																			.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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