 |
Job Description | P75894 | Confidence | 6.26% | Date | Thu Jan 5 12:15:45 GMT 2012 |
Rank | 62 | Aligned Residues | 35 |
% Identity | 17% | Template | c3ewgA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:putative transcription antitermination protein nusg; |
PDBTitle: crystal structure of the n-terminal domain of nusg (ngn) from2 methanocaldococcus jannaschii
|
Resolution | 2.04 Å |
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | A | V | S | P | G | A | L | S | T | L | F | T | D | A | R | T | H | N | G | W | R | E | T | P | V | S | D | E | T | L | R | E | I | Y |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|
|
|
|   |
|   |   |   |   |
|   |   |
|   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |   |
|   |   |
|
|   |
|
|   |   |
|
|
|   |   |   |   |   |
|
|   |   |
|
|   |   |   |
|
Template Sequence |   |
E | A | E | T | K | G | D | V | E | E | L | I | K | G | M | P | R | V | R | G | I | V | P | G | T | I | A | I | E | E | I | E | P | L | L |
Template Known Secondary structure |   |
 |  | S |
|  |  |  |  |  |  |  |  | T | T |
| T | T |  |  |  |  |
| S | S |
|
|
| G | G | G | T | T | T | T |
|
Template Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|