 |
Job Description | P77611 | Confidence | 33.05% | Date | Thu Jan 5 12:31:03 GMT 2012 |
Rank | 206 | Aligned Residues | 102 |
% Identity | 15% | Template | d1vb3a1 |
SCOP info | Tryptophan synthase beta subunit-like PLP-dependent enzymes
| Tryptophan synthase beta subunit-like PLP-dependent enzymes
| Tryptophan synthase beta subunit-like PLP-dependent enzymes
|
Resolution | 2.20 |
|
 |
  |   |
198 | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | |
|
|
. | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | |
|
. | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | . | . |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | I | L | A | H | I | L | Q | P | R | E | I | L | I | G | I | E | D | N | K | P | Q | A | I | S | M | L | R | A | V | L | A | D | S | N | . |
. |
. |
D | I | S | L | R | V | I | P | T | K | Y | P | S | G | G | A | K | Q | L | T | Y | I | . |
. |
L | T | G | K | Q | V | P | H | G | G | R | S | S | D | I | G | V | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |
|   |   |   |   |   |   |
|
|   |
|   |   |   |   |
|
|   |   | . | . |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |   |
|
|
|
|   |   |
|   |
|   |
|   |
|
|
|   |
|   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |   |
|
|   |
|
|   |
|   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |
|
|
|
|
Template Sequence |   |
E | K | L | F | C | T | L | G | G | N | I | E | T | V | A | I | D | G | D | F | D | A | C | Q | A | L | V | K | Q | A | F | D | D | E | E | L | K | V | A | L | G | L | N | S | A | N | S | I | N | I | S | R | L | L | A | Q | I | C | Y | Y | F | E | A | V | A | Q | L | P | Q | E | T | R | N | Q | L | V | V | S | V | P |
Template Known Secondary structure |   |
 |  |  |  |  | S |
|
| T | T |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  | G | G | G |
|  |  |  |  |  |  |  | T |  |  |
|
| S | T | T | S |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | T | T | S |
| T | T | T | T | T | S |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
167 | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . |
  |
  |   |
273 | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | Q | N | V | G | T | A | Y | A | V | K | R | A | V | I | D | G | E | P | I | T | E | R | V | V | T | L |
Query Conservation |   |
|   |
|
|   |
|   |   |   |
|   |   |
|   |   |   |
|   |
|   |   |   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |
|   |
|   |   |   |
|   |
|
|
|
|
|
|   |
|
|
|   |
|   |
Template Sequence |   |
S | G | N | F | G | D | L | T | A | G | L | L | A | K | S | L | G | L | P | V | K | R | F | I | A | A | T |
Template Known Secondary structure |   |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| S |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
247 | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|