Return to main results Retrieve Phyre Job Id

Job DescriptionP77611
Confidence98.27%DateThu Jan 5 12:31:03 GMT 2012
Rank9Aligned Residues84
% Identity17%Templated1nekb1
SCOP infoGlobin-like alpha-helical ferredoxin Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   363......370.........380......... 390.........400.. .......410.........420....
Predicted Secondary structure 













.......



...........









Query SS confidence 


























. . . . . . .












. . . . . . . . . . .





















Query Sequence  PSANELGEPQEEQSCIRCSACADACPA. . . . . . . DLLPQQLYWFSKG. . . . . . . . . . . QQHDKATTHNIADCIECGACAW
Query Conservation                

 

 
   

 ....... 
 
         ...........             
 


 
  
Alig confidence 


























.......












...........





















Template Conservation     
          
  

 
   

           
       
                         
  

 
  
Template Sequence  QMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVS
Template Known Secondary structure 

TTTTTS





T

TTTS

T
TT


TT
SSSTTTT




Template Predicted Secondary structure 



































Template SS confidence 















































































   135....140.........150.........160.........170.........180.........190.........200.........210....
 
   425....430.........440......
Predicted Secondary structure 




Query SS confidence 





















Query Sequence  VCPSNIPLVQYFRQEKAEIAAI
Query Conservation 


         
  
 

   
Alig confidence 





















Template Conservation   

  
 
   
  

      
Template Sequence  VCPKGLNPTRAIGHIKSMLLQR
Template Known Secondary structure 
TT


Template Predicted Secondary structure 






Template SS confidence 





















   215....220.........230......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions