 |
Job Description | P77611 | Confidence | 96.22% | Date | Thu Jan 5 12:31:03 GMT 2012 |
Rank | 43 | Aligned Residues | 68 |
% Identity | 22% | Template | d1gtea1 |
SCOP info | Globin-like
| alpha-helical ferredoxin
| Dihydropyrimidine dehydrogenase, N-terminal domain
|
Resolution | 1.65 |
|
 |
  |   |
373 | . | . | . | . | . | . | 380 | . | . | |
|
. | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
| . | . |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | E | Q | S | C | I | R | C | S | A | . |
. |
C | A | D | A | C | P | A | D | L | L | P | Q | Q | L | Y | W | F | S | K | G | Q | Q | H | D | K | A | T | T | H | N | I | A | D | C | I | E | C | G | A | C | A | W | V | C | P | S | N | I | P | L | V | Q | Y | F | R | Q | E | K |
Query Conservation |   |
  |   |   |   |
|
|   |
|
|   | . | . |
|   |   |   |
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |
|   |   |
|
|
|   |   |
|
|
|   |   |   |
|
|
|   |   |
|   |   |
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |
|
|
|
|   |
|
|
|
|
|
|
|   |   |   |   |
|
|   |   |
|   |
|   |   |
Template Sequence |   |
E | A | M | R | C | L | K | C | A | D | A | P | C | Q | K | S | C | P | T | H | L | D | I | K | S | F | I | T | S | I | S | N | K | N | Y | Y | G | A | A | K | M | I | F | S | D | N | P | L | G | L | T | C | G | M | V | C | P | T | S | D | L | C | V | G | G | C | N | L | Y | A |
Template Known Secondary structure |   |
 |  |  |  | S |
|
|
| T | T |
|  |  |  |  | T | S | T | T |
|
|
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  |
|
| G | G | G | S | G | G | G | G |
| G | G | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|