Job Description P77611 Confidence 86.01% Date Thu Jan 5 12:31:03 GMT 2012 Rank 106 Aligned Residues 77 % Identity 27% Template c3h9iB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:cation efflux system protein cusb; PDBTitle: crystal structure of the membrane fusion protein cusb from escherichia2 coli Resolution 3.40 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																							.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	A	Q	R	F	V	I	P	L	K	Q	H	I	G	A	E	G	E	L	C	.	V	S	V	G	D	K	V	L	R	G	Q	P	L	T	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	N	E	Y	Q	Y	A	I	V	Q	A	R	A	A	G	F	I	D	K	V	Y	P	L	T	V	G	D	K	V	Q	K	G	T	P	L	L	D	L	T	I	P	D	W	V	E	A	Q	S	E	Y	L	L	L	R	E	T	G	G	T	A	T	Q	T	E	G	I	L	E	R	L	R	L	A	G	M	P	E	A	D	I
Template Known Secondary structure		B		T	T									S									S			S	S					T	T																								S																		T
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
									75	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.					.
Query SS confidence		.	.	.	.	.	.	.					.
Query Sequence		.	.	.	.	.	.	.	R	G	K	M	.	L	P	V	H	A	P	T	S	G	T	V	T	A	I	A	P	H	S	T	A	H	P	S	A	L	A	E	L	S	V	I	I	D	A	D	G
Query Conservation		.	.	.	.	.	.	.					.
Alig confidence		.	.	.	.	.	.	.					.
Template Conservation
Template Sequence		R	R	L	I	A	T	Q	K	I	Q	T	R	F	T	L	K	A	P	I	D	G	V	I	T	A	F	D	L	R	A	G	M	N	I	A	K	D	N	V	V	A	K	I	Q	G	M	D	P
Template Known Secondary structure																			S	S					S						S	S					S											S
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions