 |
Job Description | P77611 | Confidence | 50.11% | Date | Thu Jan 5 12:31:03 GMT 2012 |
Rank | 159 | Aligned Residues | 39 |
% Identity | 31% | Template | c3a5dB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:v-type atp synthase alpha chain; |
PDBTitle: inter-subunit interaction and quaternary rearrangement2 defined by the central stalk of prokaryotic v1-atpase
|
Resolution | 4.80 Å |
|
  |   |
56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
. | . | . | . | . | . | |
. | 80 | . | . | . | . | |
|
. | . | . | . | . | 90 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |
|
|
|
|
|  |  |  |
|
|  |  |  |  | . |
|
|
|
|
|  | . |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . |
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | L | C | V | S | V | G | D | K | V | L | R | G | Q | P | L | T | . |
R | G | R | G | K | M | . |
L | P | V | H | A | P | . |
. |
T | S | G | T | V | T | A | I | A | P |
Query Conservation |   |
  |   |   |
|   |   |
|
|   |
|   |   |
|
|   |
|   | . |   |   |   |   |   |   | . |   |   |   |
|
|   | . | . |   |
|
|   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|   |   |
|   |   |
|
|   |   |
|   |
|   |
|   |   |   |   |
|   |
|   |   |
|   |   |   |   |
|   |   |   |   |
|   |   |
Template Sequence |   |
T | P | M | V | K | P | G | D | E | V | R | G | G | M | V | L | G | T | V | P | E | F | G | F | T | H | K | I | L | V | P | P | D | V | R | G | R | V | K | E | V | K | P |
Template Known Secondary structure |   |
 |  |
|
|
| T | T |
|  |  |
| T | T |
|  |  |  |  |  |
| S | S | S | S |
|  |  |  |  |
|
| T | T |
|
|  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|