Job Description P77611 Confidence 92.36% Date Thu Jan 5 12:31:03 GMT 2012 Rank 91 Aligned Residues 162 % Identity 9% Template c2zv4O_ PDB info PDB header:structural protein Chain: O: PDB Molecule:major vault protein; PDBTitle: the structure of rat liver vault at 3.5 angstrom resolution Resolution 3.50 Å

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		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	E	Q	Q	V	D	P	R	K	A	A	V	E	A	A	I	A	R	A	K	A	R	K	L	E	Q	Q	Q	A	N	A	E	P	E	E	Q	V	D	P	R	K	A	A	V	E	A	A	I	A	R	A	K	A	R	K	L	E	Q	Q	Q	A	N	A	E	P	E	Q	Q	V	D	P	R	K	A	A	V	E	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	P	V	D	Q	R	T	R	D	A	L	Q	R	S	V	Q	L	A	I	E	I	T	T	N	S	Q	E	A	A	A	K	H	E	A	Q	R	L	E	Q	E	A	R	G	R	L	E	R	Q	K	I	L	D	Q	S	E	A	E	K	A	R	K	E	L	L	E	L	E	A	M	S	M	A	V	E	S	T	G	N	A	K
Template Known Secondary structure				S	S
Template Predicted Secondary structure
Template SS confidence
		644	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.
		659	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	R	A	K	A	R	K	R	E	Q	Q	P	A	N	A	E	P	E	E	Q	V	D	P	R	K	A	A	V	E	A	A	I	A	R	A	K	A	R	K	L	E	Q	Q	Q	A	N	A	V	P	E	E	Q	V	D	P	R	K	A	A	V	A	A	A	I	A	R	A	Q	A	K	K	A	A	Q	Q	K	V	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	A	E	S	R	A	E	A	A	R	I	E	G	E	G	S	V	L	Q	A	K	L	K	A	Q	A	L	A	I	E	T	E	A	E	L	E	R	V	K	K	V	R	E	M	E	L	I	Y	A	R	A	Q	L	E	L	E	V	S	K	A	Q	Q	L	A	N	V	E	A	K	K	F	K	E	M	T	E	A	L	G
Template Known Secondary structure																																T	T	T	T	T																		T																										S
Template Predicted Secondary structure
Template SS confidence
		724	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.
		739	740
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		804	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions