Return to main results Retrieve Phyre Job Id

Job DescriptionP77611
Confidence96.31%DateThu Jan 5 12:31:03 GMT 2012
Rank41Aligned Residues85
% Identity16%Templatec2q8iB_
PDB info PDB header:transferaseChain: B: PDB Molecule:dihydrolipoyllysine-residue acetyltransferase component of PDBTitle: pyruvate dehydrogenase kinase isoform 3 in complex with antitumor drug2 radicicol
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40......... 50.........60.........70.. .......80.........90........ .100.........
Predicted Secondary structure 






.....













..













.





Query SS confidence 











. . . . .






















. .

























.










Query Sequence  PLAQRFVIPLKQ. . . . . HIGAEGELCVSVGDKVLRGQPLT. . RGRGKMLPVHAPTSGTVTAIAPHSTA. HPSALAELSVI
Query Conservation              .....  
      
  

 
  

 
 ..         

  

 
  
      .         
 
Alig confidence 











.....






















..

























.










Template Conservation    
  
 
  
 

     
 
  
 
  

 
  

 
  


 
    
 

  
 
  
 
  
   
  
  
  
Template Sequence  SYPPHMQVLLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCII
Template Known Secondary structure 


S



STT


S
TT

TT

SS


S
SS
TT

STT
Template Predicted Secondary structure 






































Template SS confidence 















































































   128.130.........140.........150.........160.........170.........180.........190.........200.......
 
   110.........120.......
Predicted Secondary structure 











Query SS confidence 

















Query Sequence  IDADGEDCWIPRDGWADY
Query Conservation 
  
              
Alig confidence 




.....







Template Conservation       .....   
    
Template Sequence  VEKEA. . . . . DISAFADY
Template Known Secondary structure  SSGG.....GSGGGTT
Template Predicted Secondary structure 



.....



Template SS confidence 

















   208.210.. .......220
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions