 |
Job Description | P77611 | Confidence | 96.79% | Date | Thu Jan 5 12:31:03 GMT 2012 |
Rank | 31 | Aligned Residues | 69 |
% Identity | 22% | Template | c2fgoA_ |
PDB info |
PDB header:electron transport | Chain: A: PDB Molecule:ferredoxin; |
PDBTitle: structure of the 2[4fe-4s] ferredoxin from pseudomonas2 aeruginosa
|
Resolution | 1.32 Å |
|
 |
  |   |
377 | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | |
430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | I | R | C | S | A | C | A | D | A | C | P | A | D | L | L | P | Q | Q | L | Y | W | F | S | K | G | Q | Q | H | D | K | A | T | T | H | N | I | A | D | C | I | E | C | G | A | C | A | W | V | C | P | S | N | . |
I | P | L | V | Q | Y | F | R | Q | E | K | A | E | I | A | A | I | R | Q | E |
Query Conservation |   |
|
|   |
|
|   |
|   |   |   |
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |
|
|
|   |   | . |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |
|   |   |   |
|
|   |   |
|
|   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|
|   |
|   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
C | I | N | C | D | V | C | E | P | E | C | P | N | G | A | I | S | . |
. |
. |
. |
Q | G | E | E | I | Y | V | I | D | P | N | L | C | T | E | C | V | G | H | Y | D | E | P | Q | C | Q | Q | V | C | P | V | D | C | I | P | L | D | D | A | N | V | E | S | K | D | Q | L | M | E | K | Y | R | K |
Template Known Secondary structure |   |
|
|
|
|
| T | T | G | G | G |
| T | T |
|
|  |  | . | . | . | . |  |
| S | S | S |  |  |  |
| T | T | T |
|
| T | T | T | T | T |
| S | S |
|  |  |  |  |  |
| T | T |
|
|
|
| B |
| T | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  | . | . | . | . |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
|
|
|
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|