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Job DescriptionP77611
Confidence84.35%DateThu Jan 5 12:31:03 GMT 2012
Rank109Aligned Residues313
% Identity8%Templatec2dfsA_
PDB info PDB header:contractile protein/transport proteinChain: A: PDB Molecule:myosin-5a; PDBTitle: 3-d structure of myosin-v inhibited state
Resolution24.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   421........430.........440.........450.........460.........470.........480.........490.........500
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Query Sequence  ACAWVCPSNIPLVQYFRQEKAEIAAIRQEEKRAAEAKARFEARQARLEREKAARLERHKSAAVQPAAKDKDAIAAALARV
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Template Sequence  TCKNVLEKLILDKDKYQFGKTKI. . FFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGH
Template Known Secondary structure  TTTS

GGG
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TT
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   727..730.........740......... 750.........760.........770.........780.........790.........800....
 
   501........510.........520.........530.........540.........550.........560.........570.........580
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Query Sequence  KEKQAQATQPIVIKAGERPDNSAIIAAREARKAQARAKQAELQQTNDAATVADPRKTAVEAAIARAKARKLEQQQANAEP
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Template Sequence  QARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYH
Template Known Secondary structure  TTTTT
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   805....810.........820.........830.........840.........850.........860.........870.........880....
 
   581........590.........600.........610.........620.........630.........640.........650.........660
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Query Sequence  EQQVDPRKAAVEAAIARAKARKLEQQQANAEPEEQVDPRKAAVEAAIARAKARKLEQQQANAEPEQQVDPRKAAVEAAIA
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Template Sequence  RTLKAIVYLQCCYRRMMAKRELKKLMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQT
Template Known Secondary structure  TTTTT

T
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   885....890.........900.........910.........920.........930.........940.........950.........960....
 
   661........670.........680.........690.........700.........710.........720.........730.....
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Query Sequence  RAKARKREQQPANAEPEEQVDPRKAAVEAAIARAKARKLEQQQANAVPEEQVDPRKAAVAAAIARAQAKKAAQQK
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Template Sequence  EKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEITETMEKKLVEETKQLELDLNDERLRYQ
Template Known Secondary structure  T
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   1006...1010.........1020.........1030.........1040.........1050.........1060.........1070.........1080
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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