Job Description P77611 Confidence 43.57% Date Thu Jan 5 12:31:03 GMT 2012 Rank 172 Aligned Residues 47 % Identity 19% Template c2b5lC_ PDB info PDB header:protein binding/viral protein Chain: C: PDB Molecule:nonstructural protein v; PDBTitle: crystal structure of ddb1 in complex with simian virus 5 v2 protein Resolution 2.85 Å

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		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.						.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		G	G	P	L	M	G	F	T	L	P	W	L	D	V	P	V	V	K	I	T	N	C	L	L	A	.	.	.	.	.	P	S	A	N	E	L	G	E	P	Q	E	E	Q	S	C	I	R	C	S	A	C	A	D	A	C
Query Conservation																											.	.	.	.	.
Alig confidence									.	.																	.	.	.	.	.																	.
Template Conservation									.	.																																						.
Template Sequence		G	R	D	T	G	G	F	.	.	H	R	R	E	Y	S	I	G	W	V	G	D	E	V	K	V	T	E	W	C	N	P	S	C	S	P	I	T	A	A	A	R	R	F	E	C	T	.	C	H	Q	C	P	V	T	C
Template Known Secondary structure		S	S	S	S		S	S	.	.										S	T	T											S	S	S				S	S							S	.	S	S	S			S
Template Predicted Secondary structure									.	.																																						.
Template SS confidence
		164	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions