Job Description P77611 Confidence 22.46% Date Thu Jan 5 12:31:03 GMT 2012 Rank 259 Aligned Residues 47 % Identity 15% Template c1y7nA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding family PDBTitle: solution structure of the second pdz domain of the human2 neuronal adaptor x11alpha Resolution UNK

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	V	T	A	I	A	P	H	S	T	A	H	P	S	A	L	A	E	L	S	V	I	I	D	A	D	G	E	D	C	W	I	P	R	D	G	W	A	D	Y	R	T	R	S	R	E	E	L	I	E	R	I	H	Q	F	G
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	I	C	S	L	M	R	G	G	I	A	E	R	G	G	V	R	V	G	H	R	I	I	E	I	N	G	.	.	.	.	.	.	.	.	.	.	Q	S	V	V	A	T	P	H	E	K	I	V	H	I	L	S	N	A	V
Template Known Secondary structure		T							T	T	S						T			S	S							T	T	.	.	.	.	.	.	.	.	.	.				T	T	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60											.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions