Job Description P45577 Confidence 30.00% Date Thu Jan 5 12:03:23 GMT 2012 Rank 37 Aligned Residues 48 % Identity 25% Template c3p8bB_ PDB info PDB header:transferase/transcription Chain: B: PDB Molecule:transcription antitermination protein nusg; PDBTitle: x-ray crystal structure of pyrococcus furiosus transcription2 elongation factor spt4/5 Resolution 1.80 Å

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		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.
Predicted Secondary structure																	.															.	.											.	.	.
Query SS confidence																	.															.	.											.	.	.
Query Sequence		S	A	L	T	V	G	Q	A	L	K	V	K	A	G	Q	.	N	A	M	D	A	T	V	L	E	I	T	K	D	G	.	.	V	R	V	Q	L	N	S	G	M	S	.	.	.	L	I	V	R	A	E	H	L	V
Query Conservation																	.															.	.											.	.	.
Alig confidence																	.															.	.											.	.	.
Template Conservation
Template Sequence		S	G	L	E	P	G	D	L	V	E	V	I	A	G	P	F	K	G	Q	K	A	K	V	V	K	I	D	E	S	K	D	E	V	V	V	Q	F	I	D	A	I	V	P	I	P	V	T	I	K	G	D	Y	V	R
Template Known Secondary structure		T	T			T	T							S	S	T	T	T	T										T	T	T	T							S	S		S	S								G	G	G
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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