 |
Job Description | P45577 | Confidence | 20.80% | Date | Thu Jan 5 12:03:23 GMT 2012 |
Rank | 55 | Aligned Residues | 34 |
% Identity | 18% | Template | c3kw2A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:probable r-rna methyltransferase; |
PDBTitle: crystal structure of probable rrna-methyltransferase from2 porphyromonas gingivalis
|
Resolution | 2.00 Å |
|
  |   |
186 | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | |
. | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |
|
|
|
| . |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | V | G | Q | A | L | K | V | K | A | G | Q | N | A | . |
M | D | A | T | V | L | E | I | T | K | D | G | V | R | V | Q | L | N | S |
Query Conservation |   |
|   |   |
|   |   |
|   |
|   |   |
|   |   |   | . |   |   |
|   |
|   |
|
|   |
|   |   |
|   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |
|   |
|   |   |
|   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
X | Q | A | G | D | R | L | R | L | T | D | G | R | G | S | F | F | D | A | V | I | E | T | A | D | R | K | S | C | Y | V | S | V | C | G |
Template Known Secondary structure |   |
|
| T | T |
|  |  |  |  |  |
| S | B | S |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|